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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VAL2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR  60
   61 ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI SMNVSHESNG KDFPSFASAE 120
  121 HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI 180
  181 SLGPTLMTSP FHDAAVDDRS KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH 240
  241 VARPPPEGRG KTQLLPRYWP RITDQELLQL SGQYPHLSNS KIIPLFEKVL SASDAGRIGR 300
  301 LVLPKACAEA YFPPISLPEG LPLKIQDIKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM 360
  361 QLQAGDTVTF SRTEPEGKLV MGYRKATNST ATQMFKGSSE PNLNMFSNSL NPGCGDINWS 420
  421 KLEKSEDMAK DNLFLQSSLT SARKRVRNIG TKSKRLLIDS VDVLELKITW EEAQELLRPP 480
  481 QSTKPSIFTL ENQDFEEYDE PPVFGKRTLF VSRQTGEQEQ WVQCDACGKW RQLPVDILLP 540
  541 PKWSCSDNLL DPGRSSCSAP DELSPREQDT LVRQSKEFKR RRLASSNEKL NQSQDASALN 600
  601 SLGNAGITTT GEQGEITVAA TTKHPRHRAG CSCIVCSQPP SGKGKHKPSC TCTVCEAVKR 660
  661 RFRTLMLRKR NKGEAGQASQ QAQSQSECRD ETEVESIPAV ELAAGENIDL NSDPGASRVS 720
  721 MMRLLQAAAF PLEAYLKQKA ISNTAGEQQS SDMVSTEHGS SSAAQETEKD TTNGAHDPVN 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle