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Protein Overview: FWA_ARATH

General Information:
Name(s) found: FWA_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Homeobox-leucine zipper protein HDG6 OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 686 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: regulation of gene expression by genetic imprinting [IEP]
    [NOT]regulation of flower development [IEP]
    regulation of transcription, DNA-dependent [ISS]
    gene silencing by RNA [IMP]
    positive regulation of flower development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [IPI]
    protein homodimerization activity [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQGDLDAV GNIPKPGEAE GDEIDMINDM SGVNDQDGGR MRRTHRRTAY QTQELENFYM  60
   61 ENPHPTEEQR YELGQRLNMG VNQVKNWFQN KRNLEKINND HLENVTLREE HDRLLATQDQ 120
  121 LRSAMLRSLC NICGKATNCG DTEYEVQKLM AENANLEREI DQFNSRYLSH PKQRMVSTSE 180
  181 QAPSSSSNPG INATPVLDFS GGTRTSEKET SIFLNLAITA LRELITLGEV DCPFWMIDPI 240
  241 VRSKGVSKIY EKYRSSFNNV TKPPGQIVEA SRAKGLVPMT CVTLVKTLMD TGKWVNVFAP 300
  301 IVPVASTHKV LSTGSGGTKS GSLQQIQAEF QVISPLVPKR KVTFIRYCKE IRQGLWVVVD 360
  361 VTPTQNPTLL PYGCSKRLPS GLIIDDLSNG YSQVTWIEQA EYNESHIHQL YQPLIGYGIG 420
  421 LGAKRWLATL QRHCESLSTL SSTNLTEISP GLSAKGATEI VKLAQRMTLN YYRGITSPSV 480
  481 DKWQKIQVEN VAQNMSFMIR KNVNEPGELT GIVLSASTSV WLPVNQHTLF AFISHLSFRH 540
  541 EWDILTNDTT MEETIRIQKA KRHGNIISLL KIVNNGMLVL QEIWNDASGA MVVYAPVETN 600
  601 SIELVKRGEN SDSVKFLPSG FSIVPDGVNG SYHRGNTGGG CLLTFGLQIL VGINPTAALI 660
  661 QGTVKSVETL MAHTIVKIKS ALDLQT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 22.0 DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
    2 View Details [105..207] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [208..475] FFAS03 2.7 No description for 2r55A was found.
    4 View Details [476..564] deduced N/A No confident structure predictions are available.
    5 View Details [565..686] MSA 2.055975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle