| Protein: | FWA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 686 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FWA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
789.0 | [0..24] | [685..10] |
|
|
782.0 | [0..3] | [685..16] |
|
|
774.0 | [0..1] | [682..66] |
|
|
771.0 | [0..17] | [686..66] |
|
|
769.0 | [0..19] | [686..70] |
|
|
769.0 | [0..10] | [685..73] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MNGQGDLDAV GNIPKPGEAE GDEIDMINDM SGVNDQDGGR MRRTHRRTAY QTQELENFYM 60
61 ENPHPTEEQR YELGQRLNMG VNQVKNWFQN KRNLEKINND HLEN
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1homA |
| Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [105-207] |
1 11 21 31 41 51
| | | | | |
1 VTLREEHDRL LATQDQLRSA MLRSLCNICG KATNCGDTEY EVQKLMAENA NLEREIDQFN 60
61 SRYLSHPKQR MVSTSEQAPS SSSNPGINAT PVLDFSGGTR TSE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.824 | a.7.1 | Spectrin repeat |
|
Region A: Residues: [208-475] |
1 11 21 31 41 51
| | | | | |
1 KETSIFLNLA ITALRELITL GEVDCPFWMI DPIVRSKGVS KIYEKYRSSF NNVTKPPGQI 60
61 VEASRAKGLV PMTCVTLVKT LMDTGKWVNV FAPIVPVAST HKVLSTGSGG TKSGSLQQIQ 120
121 AEFQVISPLV PKRKVTFIRY CKEIRQGLWV VVDVTPTQNP TLLPYGCSKR LPSGLIIDDL 180
181 SNGYSQVTWI EQAEYNESHI HQLYQPLIGY GIGLGAKRWL ATLQRHCESL STLSSTNLTE 240
241 ISPGLSAKGA TEIVKLAQRM TLNYYRGI
|
| Detection Method: | |
| Confidence: | 2.7 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [476-564] |
1 11 21 31 41 51
| | | | | |
1 TSPSVDKWQK IQVENVAQNM SFMIRKNVNE PGELTGIVLS ASTSVWLPVN QHTLFAFISH 60
61 LSFRHEWDIL TNDTTMEETI RIQKAKRHG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-686] |
1 11 21 31 41 51
| | | | | |
1 NIISLLKIVN NGMLVLQEIW NDASGAMVVY APVETNSIEL VKRGENSDSV KFLPSGFSIV 60
61 PDGVNGSYHR GNTGGGCLLT FGLQILVGIN PTAALIQGTV KSVETLMAHT IVKIKSALDL 120
121 QT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
