| Protein: | FWA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 686 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FWA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
789.0 | [0..24] | [685..10] |
|
|
782.0 | [0..3] | [685..16] |
|
|
774.0 | [0..1] | [682..66] |
|
|
771.0 | [0..17] | [686..66] |
|
|
769.0 | [0..19] | [686..70] |
|
|
769.0 | [0..10] | [685..73] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MNGQGDLDAV GNIPKPGEAE GDEIDMINDM SGVNDQDGGR MRRTHRRTAY QTQELENFYM 60
61 ENPHPTEEQR YELGQRLNMG VNQVKNWFQN KRNLEKINND HLEN
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1homA |
| Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [105-207] |
1 11 21 31 41 51
| | | | | |
1 VTLREEHDRL LATQDQLRSA MLRSLCNICG KATNCGDTEY EVQKLMAENA NLEREIDQFN 60
61 SRYLSHPKQR MVSTSEQAPS SSSNPGINAT PVLDFSGGTR TSE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.824 | a.7.1 | Spectrin repeat |
| View | Download | 0.803 | a.7.1 | Spectrin repeat |
| View | Download | 0.803 | a.7.1 | Spectrin repeat |
| View | Download | 0.717 | a.7.12 | Description not found. |
| View | Download | 0.660 | a.7.1 | Spectrin repeat |
| View | Download | 0.636 | a.47.5 | Description not found. |
| View | Download | 0.506 | a.7.8 | GAT domain |
| View | Download | 0.480 | a.47.2 | t-snare proteins |
| View | Download | 0.463 | a.47.2 | t-snare proteins |
| View | Download | 0.446 | a.7.1 | Spectrin repeat |
| View | Download | 0.425 | a.7.1 | Spectrin repeat |
| View | Download | 0.343 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.320 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.284 | a.7.8 | GAT domain |
| View | Download | 0.262 | a.7.8 | GAT domain |
|
Region A: Residues: [208-475] |
1 11 21 31 41 51
| | | | | |
1 KETSIFLNLA ITALRELITL GEVDCPFWMI DPIVRSKGVS KIYEKYRSSF NNVTKPPGQI 60
61 VEASRAKGLV PMTCVTLVKT LMDTGKWVNV FAPIVPVAST HKVLSTGSGG TKSGSLQQIQ 120
121 AEFQVISPLV PKRKVTFIRY CKEIRQGLWV VVDVTPTQNP TLLPYGCSKR LPSGLIIDDL 180
181 SNGYSQVTWI EQAEYNESHI HQLYQPLIGY GIGLGAKRWL ATLQRHCESL STLSSTNLTE 240
241 ISPGLSAKGA TEIVKLAQRM TLNYYRGI
|
| Detection Method: | |
| Confidence: | 2.7 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [476-564] |
1 11 21 31 41 51
| | | | | |
1 TSPSVDKWQK IQVENVAQNM SFMIRKNVNE PGELTGIVLS ASTSVWLPVN QHTLFAFISH 60
61 LSFRHEWDIL TNDTTMEETI RIQKAKRHG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.752 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.642 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.640 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.591 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.588 | d.58.49 | YajQ-like |
| View | Download | 0.588 | d.58.49 | YajQ-like |
| View | Download | 0.551 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.551 | b.59.1 | XRCC4, N-terminal domain |
| View | Download | 0.546 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.417 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.371 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.354 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.345 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [565-686] |
1 11 21 31 41 51
| | | | | |
1 NIISLLKIVN NGMLVLQEIW NDASGAMVVY APVETNSIEL VKRGENSDSV KFLPSGFSIV 60
61 PDGVNGSYHR GNTGGGCLLT FGLQILVGIN PTAALIQGTV KSVETLMAHT IVKIKSALDL 120
121 QT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.568 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.550 | N/A | N/A | d.97.1 | Cell cycle regulatory proteins |
| View | Download | 0.521 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.515 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.515 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.470 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.455 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.452 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.374 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.328 | N/A | N/A | c.44.1 | Phosphotyrosine protein phosphatases I |
| View | Download | 0.264 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.257 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.255 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
