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Protein Overview: ROGF3_ARATH

General Information:
Name(s) found: ROGF3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|186511392|ref|NP_001118903.1| Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] [NCBI NR]
  • ref|NP_191956.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|134031902|gb|ABO45688.1| At4g00460 [Arabidopsis thaliana] [NCBI NR]
  • Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1 [Swiss-Prot]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: ATROPGEF3, ROPGEF3 | ATROPGEF3/ROPGEF3 (KINASE PARTNER PROTEIN-LIKE) | chr4:211146-213094 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide exchange factor 3 | chr4:211146-213094 REVERSE LENGTH=473 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g00460 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLSNPDEN DDHQSPRSID QNDQSAVETP VYSTMSIDSF VYPRTCSETT SGFSDQIDET  60
   61 NSFCSEASPC NWPVLTESKS SKCLSGLEMQ SNECLVVQEI SEPELETMKE RFAKLLLGED 120
  121 MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF 180
  181 IPRCQNLSNG ATVEVMESRP RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM 240
  241 KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN 300
  301 SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA 360
  361 DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY VMAERAETLL FCLKQRYPEL 420
  421 SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] deduced N/A No confident structure predictions are available.
    2 View Details [77..473] PSI-BLAST 177.0 No description for 2ntxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle