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Protein Overview: RPP5_ARATH

General Information:
Name(s) found: RPP5_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Disease resistance protein RPP5 OS=Arabidopsis thaliana GN=RPP5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1449 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: defense response to fungus, incompatible interaction [IMP]
    defense response [ISS][TAS]
    Molecular Function: nucleotide binding [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSSSGRR RYDVFPSFSG VDVRKTFLSH LIEALDGKSI NTFIDHGIER SRTIAPELIS  60
   61 AIREARISIV IFSKNYASST WCLNELVEIH KCFNDLGQMV IPVFYDVDPS EVRKQTGEFG 120
  121 KVFEKTCEVS KDKQPGDQKQ RWVQALTDIA NIAGEDLLNG PNEAHMVEKI SNDVSNKLIT 180
  181 RSKCFDDFVG IEAHIEAIKS VLCLESKEAR MVGIWGQSGI GKSTIGRALF SQLSIQFPLR 240
  241 AFLTYKSTSG SDVSGMKLSW EKELLSEILG QKDIKIEHFG VVEQRLKHKK VLILLDDVDN 300
  301 LEFLKTLVGK AEWFGSGSRI IVITQDRQFL KAHDIDLVYE VKLPSQGLAL TMLCRSAFGK 360
  361 DSPPDDFKEL AFEVAKLAGH LPLGLNVLGS SLRRRGKKEW MEMMPRLRNG LNGDIMKTLR 420
  421 VSYDRLHQKD QDMFLCIACL FNGFEVSYVK DLLEDNVGLT MLSEKSLIRI TPDGHIEMHN 480
  481 LLEKLGREID RAKSKGNPGK RQFLTNFEDI HEVVTEKTGT ETLLGIRLPF EEYFSTRPLL 540
  541 IDKESFKGMR NLQYLKIGDW SDGGQPQSLV YLPLKLRLLD WDDCPLKSLP STFKAEYLVN 600
  601 LIMKYSKLEK LWEGTLPLGS LKKMNLLCSK NLKEIPDLSN ARNLEELDLE GCESLVTLPS 660
  661 SIQNAIKLRK LHCSGVILID LKSLEGMCNL EYLSVDCSRV EGTQGIVYFP SKLRLLLWNN 720
  721 CPLKRLHSNF KVEYLVKLRM ENSDLEKLWD GTQPLGRLKQ MFLRGSKYLK EIPDLSLAIN 780
  781 LEEVDICKCE SLVTFPSSMQ NAIKLIYLDI SDCKKLESFP TDLNLESLEY LNLTGCPNLR 840
  841 NFPAIKMGCS DVDFPEGRNE IVVEDCFWNK NLPAGLDYLD CLMRCMPCEF RPEYLVFLNV 900
  901 RCYKHEKLWE GIQSLGSLEE MDLSESENLT EIPDLSKATN LKHLYLNNCK SLVTLPSTIG 960
  961 NLQKLVRLEM KECTGLEVLP TDVNLSSLET LDLSGCSSLR TFPLISKSIK WLYLENTAIE1020
 1021 EILDLSKATK LESLILNNCK SLVTLPSTIG NLQNLRRLYM KRCTGLEVLP TDVNLSSLGI1080
 1081 LDLSGCSSLR TFPLISTNIV WLYLENTAIG EVPCCIEDFT RLRVLLMYCC QRLKNISPNI1140
 1141 FRLRSLMFAD FTDCRGVIKA LSDATVVATM EDSVSCVPLS ENIEYTCERF WGELYGDGDW1200
 1201 DLGTEYFSFR NCFKLDRDAR ELILRSCFKP VALPGGEIPK YFTYRAYGDS LTVTLPRSSL1260
 1261 SQSFLRFKAC LVVDPLSEGK GFYRYLEVNF GFNGKQYQKS FLEDEELEFC KTDHLFFCSF1320
 1321 KFESEMTFND VEFKFCCSNR IKECGVRLMY VSQETEYNQQ TTRSKKRMRM TSGTSEEYIN1380
 1381 LAGDQIVADT GLAALNMELS LGEGEASSST SLEGEALSVD YMITKEQDED IPFLDPVSDG1440
 1441 TWRSFYSAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] Pfam 64.09691 No description for PF01582.12 was found. No confident structure predictions are available.
    2 View Details [155..593] PSI-BLAST 15.154902 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [594..658] PSI-BLAST 8.39794 Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
    4 View Details [659..1236] PSI-BLAST 23.39794 No description for 2z64A was found.
    5 View Details [1237..1360] PSI-BLAST 5.522879 Ribonuclease inhibitor
    6 View Details [1361..1449] PSI-BLAST 29.39794 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle