| Protein: | RPP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for RPP5_ARATH.
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MAASSSSGRR RYDVFPSFSG VDVRKTFLSH LIEALDGKSI NTFIDHGIER SRTIAPELIS 60
61 AIREARISIV IFSKNYASST WCLNELVEIH KCFNDLGQMV IPVFYDVDPS EVRKQTGEFG 120
121 KVFEKTCEVS KDKQPGDQKQ RWVQALTDIA NIAG
|
| Detection Method: |  |
| Confidence: | 64.09691 |
| Match: | PF01582.12 |
| Description: | No description for PF01582.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-593] |
1 11 21 31 41 51
| | | | | |
1 EDLLNGPNEA HMVEKISNDV SNKLITRSKC FDDFVGIEAH IEAIKSVLCL ESKEARMVGI 60
61 WGQSGIGKST IGRALFSQLS IQFPLRAFLT YKSTSGSDVS GMKLSWEKEL LSEILGQKDI 120
121 KIEHFGVVEQ RLKHKKVLIL LDDVDNLEFL KTLVGKAEWF GSGSRIIVIT QDRQFLKAHD 180
181 IDLVYEVKLP SQGLALTMLC RSAFGKDSPP DDFKELAFEV AKLAGHLPLG LNVLGSSLRR 240
241 RGKKEWMEMM PRLRNGLNGD IMKTLRVSYD RLHQKDQDMF LCIACLFNGF EVSYVKDLLE 300
301 DNVGLTMLSE KSLIRITPDG HIEMHNLLEK LGREIDRAKS KGNPGKRQFL TNFEDIHEVV 360
361 TEKTGTETLL GIRLPFEEYF STRPLLIDKE SFKGMRNLQY LKIGDWSDGG QPQSLVYLPL 420
421 KLRLLDWDDC PLKSLPSTF
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [594-658] |
1 11 21 31 41 51
| | | | | |
1 KAEYLVNLIM KYSKLEKLWE GTLPLGSLKK MNLLCSKNLK EIPDLSNARN LEELDLEGCE 60
61 SLVTL
|
| Detection Method: | |
| Confidence: | 8.39794 |
| Match: | 1dceA |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [659-1236] |
1 11 21 31 41 51
| | | | | |
1 PSSIQNAIKL RKLHCSGVIL IDLKSLEGMC NLEYLSVDCS RVEGTQGIVY FPSKLRLLLW 60
61 NNCPLKRLHS NFKVEYLVKL RMENSDLEKL WDGTQPLGRL KQMFLRGSKY LKEIPDLSLA 120
121 INLEEVDICK CESLVTFPSS MQNAIKLIYL DISDCKKLES FPTDLNLESL EYLNLTGCPN 180
181 LRNFPAIKMG CSDVDFPEGR NEIVVEDCFW NKNLPAGLDY LDCLMRCMPC EFRPEYLVFL 240
241 NVRCYKHEKL WEGIQSLGSL EEMDLSESEN LTEIPDLSKA TNLKHLYLNN CKSLVTLPST 300
301 IGNLQKLVRL EMKECTGLEV LPTDVNLSSL ETLDLSGCSS LRTFPLISKS IKWLYLENTA 360
361 IEEILDLSKA TKLESLILNN CKSLVTLPST IGNLQNLRRL YMKRCTGLEV LPTDVNLSSL 420
421 GILDLSGCSS LRTFPLISTN IVWLYLENTA IGEVPCCIED FTRLRVLLMY CCQRLKNISP 480
481 NIFRLRSLMF ADFTDCRGVI KALSDATVVA TMEDSVSCVP LSENIEYTCE RFWGELYGDG 540
541 DWDLGTEYFS FRNCFKLDRD ARELILRSCF KPVALPGG
|
| Detection Method: | |
| Confidence: | 23.39794 |
| Match: | 2z64A |
| Description: | No description for 2z64A was found. |
|
Region A: Residues: [1237-1360] |
1 11 21 31 41 51
| | | | | |
1 EIPKYFTYRA YGDSLTVTLP RSSLSQSFLR FKACLVVDPL SEGKGFYRYL EVNFGFNGKQ 60
61 YQKSFLEDEE LEFCKTDHLF FCSFKFESEM TFNDVEFKFC CSNRIKECGV RLMYVSQETE 120
121 YNQQ
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1a4yA |
| Description: | Ribonuclease inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1361-1449] |
1 11 21 31 41 51
| | | | | |
1 TTRSKKRMRM TSGTSEEYIN LAGDQIVADT GLAALNMELS LGEGEASSST SLEGEALSVD 60
61 YMITKEQDED IPFLDPVSDG TWRSFYSAE
|
| Detection Method: | |
| Confidence: | 29.39794 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
