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Protein Overview: ATL17_ARATH

General Information:
Name(s) found: ATL17_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: response to chitin [IEP]
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTTILILL IVILMVSLHL YYRWYLLRSS PFNRTTAAST FFTDPSSTPG GLNPSIIKSL  60
   61 PIFTFSAVTA LFAMECSVCL SEFKDNESGR VMPNCKHTFH VHCIDMWFHS HSSCPLCRSQ 120
  121 IEPFAGGVKS SMDEVAISIS DPVYGDTNHH EGTETTGDSV PEDSQRKPAA IEISQRNLGE 180
  181 IENDLSRSHS FRSPTDEPDD IFHSEFESRS GEVLLLLLLL SEFLIFCFRR SVACK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 13.39794 EL5 RING-H2 domain
    2 View Details [131..235] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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