Protein Overview: PCFS4_ARATH

General Information:
Name(s) found:	PCFS4_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|30679905\|ref\|NP_680598.2\| PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding [Arabidopsis thaliana] [NCBI NR] gi\|110738131\|dbj\|BAF00997.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana GN=PCFS4 PE=1 SV=1 [Swiss-Prot] pre-mRNA cleavage complex-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] \| Symbols: \| pre-mRNA cleavage complex-related \| chr4:2472081-2475415 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta] hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: PCFS4 \| PCF11P-similar protein 4 \| chr4:2472083-2475417 FORWARD LENGTH=808 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] PCF11P-similar protein 4 OS=Arabidopsis thaliana GN=PCFS4 PE=1 SV=1 [ARATH-contam.fasta]
Organism:	Arabidopsis thaliana
Length:	808 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA]
Biological Process:	positive regulation of flower development [IMP] mRNA polyadenylation [IMP]
Molecular Function:	zinc ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEKILNPR LVSINSTSRK GMSVELPQKP PPPPSLLDRF KALLNQREDE FGGGEEVLPP  60
   61 SMDEIVQLYE VVLGELTFNS KPIITDLTII AGEQREHGEG IANAICTRIL EAPVEQKLPS 120
  121 LYLLDSIVKN IGRDYGRYFS SRLPEVFCLA YRQAHPSLHP SMRHLFGTWS SVFPPPVLRK 180
  181 IDMQLQLSSA ANQSSVGASE PSQPTRGIHV NPKYLRRLEP SAAENNLRGI NSSARVYGQN 240
  241 SLGGYNDFED QLESPSSLSS TPDGFTRRSN DGANPSNQAF NYGMGRATSR DDEHMEWRRK 300
  301 ENLGQGNDHE RPRALIDAYG VDTSKHVTIN KPIRDMNGMH SKMVTPWQNT EEEEFDWEDM 360
  361 SPTLDRSRAG EFLRSSVPAL GSVRARPRVG NTSDFHLDSD IKNGVSHQLR ENWSLSQNYP 420
  421 HTSNRVDTRA GKDLKVLASS VGLVSSNSEF GAPPFDSIQD VNSRFGRALP DGTWPHLSAR 480
  481 GPNSLPVPSA HLHHLANPGN AMSNRLQGKP LYRPENQVSQ SHLNDMTQQN QMLVNYLPSS 540
  541 SAMAPRPMQS LLTHVSHGYP PHGSTIRPSL SIQGGEAMHP LSSGVLSQIG ASNQPPGGAF 600
  601 SGLIGSLMAQ GLISLNNQPA GQGPLGLEFD ADMLKIRNES AISALYGDLP RQCTTCGLRF 660
  661 KCQEEHSKHM DWHVTKNRMS KNHKQNPSRK WFVSASMWLS GAEALGAEAV PGFLPTEPTT 720
  721 EKKDDEDMAV PADEDQTSCA LCGEPFEDFY SDETEEWMYK GAVYMNAPEE STTDMDKSQL 780
  781 GPIVHAKCRP ESNGGDMEEG SQRKKMRS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..260]	PSI-BLAST	42.522879	The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
2	View Details	[261..370]	deduced	N/A	No confident structure predictions are available.
3	View Details	[371..628]	MSA	4.286993	View MSA. No confident structure predictions are available.
4	View Details	[629..808]	MSA	1.165973	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.95

Protein Overview: PCFS4_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: