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Protein Overview: FK202_ARATH

General Information:
Name(s) found: FK202_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    chloroplast thylakoid lumen [IDA][ISS]
    thylakoid [IDA]
    Biological Process: photosystem II assembly [IMP]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [IDA][ISS]
    FK506 binding [ISS]
    oxidoreductase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTILSTPLS PRLTFLCETK LSLSRSNRSV CCSLSEEPKD QCLSRRSLVY VLVASPCLLL  60
   61 PALSSSAKTK SKSPYDERRL LEQNKRIQRE NNAPDEFPNF VREGFEVKVL ASDNYIKADS 120
  121 GLIYRDFNVG QGDFPKDGQQ VTFHYIGYNE SGRRIDSTYI QGSPARIRMG TNALVPGFEM 180
  181 GIRDMKPGGR RRIIIPPELG PPVGPSTFFS SKQFEVFDVE LLSIQNCERR TIIGFYSDVT 240
  241 CS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] PSI-BLAST 52.0 Macrophage infectivity potentiator protein (MIP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.355223926248969 bayes_pls_golite062009
  • isomerase activity
    		•  0.11136303327967 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  0.0710660189922594 bayes_pls_golite062009
  • peptidyl-prolyl cis-trans isomerase activity
    		•  0.0709473849313795 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle