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View Structure Prediction Details

Protein: FK202_ARATH
Organism: Arabidopsis thaliana
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK202_ARATH.

Description E-value Query
Range
Subject
Range
gi|52841028, gi|... - gi|52841028|ref|YP_094827.1| macrophage infectivity potentiator (Mip) [Legionella pneumophila subsp....
212.0 [0..1] [226..7]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTILSTPLS PRLTFLCETK LSLSRSNRSV CCSLSEEPKD QCLSRRSLVY VLVASPCLLL  60
   61 PALSSSAKTK SKSPYDERRL LEQNKRIQRE NNAPDEFPNF VREGFEVKVL ASDNYIKADS 120
  121 GLIYRDFNVG QGDFPKDGQQ VTFHYIGYNE SGRRIDSTYI QGSPARIRMG TNALVPGFEM 180
  181 GIRDMKPGGR RRIIIPPELG PPVGPSTFFS SKQFEVFDVE LLSIQNCERR TIIGFYSDVT 240
  241 CS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 1fd9A
Description: Macrophage infectivity potentiator protein (MIP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.355223926248969 bayes_pls_golite062009
isomerase activity 0.11136303327967 bayes_pls_golite062009
cis-trans isomerase activity 0.0710660189922594 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 0.0709473849313795 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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