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Protein Overview: gi|42572645

General Information:
Name(s) found: gi|42572645 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42572645|ref|NP_974418.1| tatD-related deoxyribonuclease family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters [IEA]
    deoxyribonuclease activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKMIGKS DIAVNFTDGM FKGLYHGKNC HVPDIATVLN RAWSAGVDRI IVTGGSLEES  60
   61 REALAIAETD GRLFCTVGVH PTRCNEFEES GDPEKHYQAL FSLAKEGMQK GKVVAIGECG 120
  121 LDYDRLQFCS VDIQKKYFEK QFELAYATKL PMFLHMRAAA EDFCEIVERN KNRFTGGVAH 180
  181 SFTGSASDRD KLLSFDKMYL GVNGCSLKTA ENLEVMKGIP VERMMIETDS PYCDIKNTHA 240
  241 GIKFVKSTWP SKKKEKYDQE SLVKGRNEPC LVRQVLEVVA GYKGLGDLNQ VSSTLYHNTC 300
  301 RVFFPQDLDS AADALLSGHH ETD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] PSI-BLAST 72.69897 No description for 2gzxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle