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View Structure Prediction Details

Protein: gi|42572645
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572645.

Description E-value Query
Range
Subject
Range
gi|79442300, gi|... - gi|79442300|ref|NP_190807.3| tatD-related deoxyribonuclease family protein [Arabidopsis thaliana], g...
334.0 [0..4] [323..1]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKMIGKS DIAVNFTDGM FKGLYHGKNC HVPDIATVLN RAWSAGVDRI IVTGGSLEES  60
   61 REALAIAETD GRLFCTVGVH PTRCNEFEES GDPEKHYQAL FSLAKEGMQK GKVVAIGECG 120
  121 LDYDRLQFCS VDIQKKYFEK QFELAYATKL PMFLHMRAAA EDFCEIVERN KNRFTGGVAH 180
  181 SFTGSASDRD KLLSFDKMYL GVNGCSLKTA ENLEVMKGIP VERMMIETDS PYCDIKNTHA 240
  241 GIKFVKSTWP SKKKEKYDQE SLVKGRNEPC LVRQVLEVVA GYKGLGDLNQ VSSTLYHNTC 300
  301 RVFFPQDLDS AADALLSGHH ETD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 2gzxA
Description: No description for 2gzxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle