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Protein Overview: gi|30687388, gi|...

General Information:
Name(s) found: gi|79313357 [NCBI NR]
gi|30687388 [NCBI NR]
Description(s) found:
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  • gi|79313357|ref|NP_001030758.1| FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen [Arabidopsis tha [NCBI NR]
  • ref|NP_189062.2| monooxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • monooxygenase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to putative oxygenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | monooxygenase | chr3:8748102-8751173 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • monooxygenase/ oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:8748095-8751166 REVERSE LENGTH=507 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Ubiquinone biosynthesis monooxygenase Coq6 OS=Arabidopsis thaliana GN=At3g24200 PE=2 SV=1 [ARATH-contam.fasta]
  • FAD/NAD(P)-binding oxidoreductase family protein OS=Arabidopsis thaliana GN=At3g24200 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 507 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    ubiquinone biosynthetic process [IEA]
    Molecular Function: oxidoreductase activity [IEA]
    FAD binding [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen [IEA]
    monooxygenase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDRVLARN LRTSVCGTRI LQRTCSTVVT HDVSTSCSNE SNALNNSTDD GPQHDIAIVG  60
   61 GGMVGIALAA SLASKPLTKH LNVAIIDNNP LLGRRNIIEK GHQPDPRVST VTPATISFLK 120
  121 DIGAWKYIEQ QRHAYFDKMQ VWDYTGLGYT RYNANDVHQD VLGCVVENKV LQSSQLSCVQ 180
  181 ESDLQKTVYP ARLNAMDMLP SSSLTGLGEV PSTTDLFMRG RLAKLELSDG NRVYAKLVVG 240
  241 ADGSKSRVRE LAGIKTTGWN YSQNAIICTV EHTAENYTAW QRFLPNGPIA LLPIGDKFSN 300
  301 IVWTMDPKEA SDRKLMNEDD FIKAVNDALD SGYGPNPETT SSRDSLSWLT GDATISAKER 360
  361 FETPPKVVKL SSERMMFPLS LRHAKDYVSK RVALVGDSAH TVHPLAGQGV NLGFADACAL 420
  421 SKAIAEGIAL GTDIGEANLL KRYEAERKPA NIAMMAVLDG IQKMYSLDFG PLNALRAAAF 480
  481 HGAHYISPLK KRIISYASGE QSLPLFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..507] PSI-BLAST 47.0 No description for 2gmhA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.94752631746117 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.52511707514198 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  0.876978863121464 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.643810447309487 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.23045510393832 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.130601418359425 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  0.0438965603843511 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle