YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FAMA_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..176] MSA 4.679997 View MSA. No confident structure predictions are available.
2 View Details [177..310] PSI-BLAST 20.69897 Myc prot-oncogene protein
3 View Details [311..414] FFAS03 1.62 ACT domain protein from Streptococcus pneumoniae

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
  • 0.43204604575196 bayes_pls_golite062009
  • DNA binding
  • 0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
  • 0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
  • 0.09721565916723 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
  • 0.0923752113053079 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle