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Protein Overview: LOX5_ARATH

General Information:
Name(s) found: LOX5_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Linoleate 9S-lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 886 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: root development [IMP]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [IEA]
    metal ion binding [IEA]
    iron ion binding [IEA]
    electron carrier activity [IEA]
    lipoxygenase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV  60
   61 NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK IKTSVTAEET AFGVTFDWDE 120
  121 SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS 180
  181 NKAYLPSETP ELIKELREEE LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP 240
  241 VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK 300
  301 SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR 360
  361 NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV ISRLQEFPPK SCLDSAKYGN 420
  421 QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL 480
  481 QADGTLKPLA IELSLPHAQG ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI 540
  541 SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV 600
  601 FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI 660
  661 WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH GDKRHESWWP SMQTRDDLIE 720
  721 TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT 780
  781 ITPQLQTLLG ISIIEILSMH STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII 840
  841 RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..886] PSI-BLAST 1000.0 Lipoxigenase, C-terminal domain; Plant lipoxigenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • arachidonate 5-lipoxygenase activity
    		•  8.44515061433916 bayes_pls_golite062009
  • arachidonate 12-lipoxygenase activity
    		•  6.08213265273158 bayes_pls_golite062009
  • hepoxilin-epoxide hydrolase activity
    		•  4.96120669616017 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  3.68734614042811 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  3.61969258161886 bayes_pls_golite062009
  • dioxygenase activity
    		•  3.30721216596384 bayes_pls_golite062009
  • binding
    		•  1.8976030946043 bayes_pls_golite062009
  • protein binding
    		•  1.53930087292625 bayes_pls_golite062009
  • catalytic activity
    		•  1.04649784555215 bayes_pls_golite062009
  • arachidonate 15-lipoxygenase activity
    		•  0.440928568408097 bayes_pls_golite062009
  • ether hydrolase activity
    		•  0.0770523899606701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle