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Protein Overview: BXL5_ARATH

General Information:
Name(s) found: BXL5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15230897|ref|NP_188596.1| glycosyl hydrolase family 3 protein [Arabidopsis thaliana] [NCBI NR]
  • Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 [Swiss-Prot]
  • glycosyl hydrolase family 3 protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | glycosyl hydrolase family 3 protein | chr3:6815619-6818314 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Glycosyl hydrolase family protein | chr3:6815613-6818308 REVERSE LENGTH=781 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 781 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRRFVRLS LLIIALVSSL CESQKNFACD ISAPATAKYG FCNVSLSYEA RAKDLVSRLS  60
   61 LKEKVQQLVN KATGVPRLGV PPYEWWSEAL HGVSDVGPGV HFNGTVPGAT SFPATILTAA 120
  121 SFNTSLWLKM GEVVSTEARA MHNVGLAGLT YWSPNVNVFR DPRWGRGQET PGEDPLVVSK 180
  181 YAVNYVKGLQ DVHDAGKSRR LKVSSCCKHY TAYDLDNWKG IDRFHFDAKV TKQDLEDTYQ 240
  241 TPFKSCVEEG DVSSVMCSYN RVNGIPTCAD PNLLRGVIRG QWRLDGYIVS DCDSIQVYFN 300
  301 DIHYTKTRED AVALALKAGL NMNCGDFLGK YTENAVKLKK LNGSDVDEAL IYNYIVLMRL 360
  361 GFFDGDPKSL PFGNLGPSDV CSKDHQMLAL EAAKQGIVLL ENRGDLPLPK TTVKKLAVIG 420
  421 PNANATKVMI SNYAGVPCKY TSPIQGLQKY VPEKIVYEPG CKDVKCGDQT LISAAVKAVS 480
  481 EADVTVLVVG LDQTVEAEGL DRVNLTLPGY QEKLVRDVAN AAKKTVVLVI MSAGPIDISF 540
  541 AKNLSTIRAV LWVGYPGEAG GDAIAQVIFG DYNPSGRLPE TWYPQEFADK VAMTDMNMRP 600
  601 NSTSGFPGRS YRFYTGKPIY KFGYGLSYSS FSTFVLSAPS IIHIKTNPIM NLNKTTSVDI 660
  661 STVNCHDLKI RIVIGVKNHG LRSGSHVVLV FWKPPKCSKS LVGGGVPLTQ LVGFERVEVG 720
  721 RSMTEKFTVD FDVCKALSLV DTHGKRKLVT GHHKLVIGSN SDQQIYHHLN VRLAGDSTVA 780
  781 I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..615] PSI-BLAST 129.0 Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
    2 View Details [616..781] FFAS03 1.23 Dex49A from Penicillium minioluteum

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.03213713925196 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.00088487541785 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • hydrolase activity
    		•  1.15751720508639 bayes_pls_golite062009
  • chitinase activity
    		•  0.700083867878222 bayes_pls_golite062009
  • glucosidase activity
    		•  0.528679164808812 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.220458268933622 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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