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View Structure Prediction Details

Protein: BXL5_ARATH
Organism: Arabidopsis thaliana
Length: 781 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BXL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|25453520, gi|... - gi|9294427|dbj|BAB02547.1| beta-1,4-xylosidase [Arabidopsis thaliana], pir||T52390 beta-1,4-xylosida...
809.0 [0..1] [778..1]

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Predicted Domain #1
Region A:
Residues: [1-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRRFVRLS LLIIALVSSL CESQKNFACD ISAPATAKYG FCNVSLSYEA RAKDLVSRLS  60
   61 LKEKVQQLVN KATGVPRLGV PPYEWWSEAL HGVSDVGPGV HFNGTVPGAT SFPATILTAA 120
  121 SFNTSLWLKM GEVVSTEARA MHNVGLAGLT YWSPNVNVFR DPRWGRGQET PGEDPLVVSK 180
  181 YAVNYVKGLQ DVHDAGKSRR LKVSSCCKHY TAYDLDNWKG IDRFHFDAKV TKQDLEDTYQ 240
  241 TPFKSCVEEG DVSSVMCSYN RVNGIPTCAD PNLLRGVIRG QWRLDGYIVS DCDSIQVYFN 300
  301 DIHYTKTRED AVALALKAGL NMNCGDFLGK YTENAVKLKK LNGSDVDEAL IYNYIVLMRL 360
  361 GFFDGDPKSL PFGNLGPSDV CSKDHQMLAL EAAKQGIVLL ENRGDLPLPK TTVKKLAVIG 420
  421 PNANATKVMI SNYAGVPCKY TSPIQGLQKY VPEKIVYEPG CKDVKCGDQT LISAAVKAVS 480
  481 EADVTVLVVG LDQTVEAEGL DRVNLTLPGY QEKLVRDVAN AAKKTVVLVI MSAGPIDISF 540
  541 AKNLSTIRAV LWVGYPGEAG GDAIAQVIFG DYNPSGRLPE TWYPQEFADK VAMTDMNMRP 600
  601 NSTSGFPGRS YRFYT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 129.0
Match: 1ex1A
Description: Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.03213713925196 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.00088487541785 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
hydrolase activity 1.15751720508639 bayes_pls_golite062009
chitinase activity 0.700083867878222 bayes_pls_golite062009
glucosidase activity 0.528679164808812 bayes_pls_golite062009
hexosaminidase activity 0.220458268933622 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [616-781]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKPIYKFGYG LSYSSFSTFV LSAPSIIHIK TNPIMNLNKT TSVDISTVNC HDLKIRIVIG  60
   61 VKNHGLRSGS HVVLVFWKPP KCSKSLVGGG VPLTQLVGFE RVEVGRSMTE KFTVDFDVCK 120
  121 ALSLVDTHGK RKLVTGHHKL VIGSNSDQQI YHHLNVRLAG DSTVAI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 1ogmX
Description: Dex49A from Penicillium minioluteum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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