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Protein Overview: gi|42563399

General Information:
Name(s) found: gi|42563399 [NCBI NR]
Description(s) found:
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  • gi|42563399|ref|NP_186780.3| acid phosphatase/ oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] [NCBI NR]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | acid phosphatase/ oxidoreductase/ transition metal ion binding | chr3:94350-101610 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • acid phosphatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phosphoglycerate mutase-like family protein | chr3:94343-101603 REVERSE LENGTH=1056 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phosphoglycerate mutase-like-like protein OS=Arabidopsis thaliana GN=At3g01310 PE=2 SV=1 [ARATH-contam.fasta]
  • Phosphoglycerate mutase-like protein OS=Arabidopsis thaliana GN=At3g01310 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 1056 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: transition metal ion binding [IEA]
    oxidoreductase activity [IEA]
    acid phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMEEGASGV GEKIKIGVCV MEKKVKCGSE VFSAPMGEIL DRLQSFGEFE ILHFGDKVIL  60
   61 EDPIESWPIC DCLIAFHSSG YPLEKAQAYA ALRKPFLVNE LDPQYLLHDR RKVYEHLEMY 120
  121 GIPVPRYACV NRKVPNQDLH YFVEEEDFVE VHGERFWKPF VEKPVNGDDH SIMIYYPSSA 180
  181 GGGMKELFRK IGNRSSEFHP DVRRVRREGS YIYEEFMATG GTDVKVYTVG PEYAHAEARK 240
  241 SPVVDGVVMR NTDGKEVRYP VLLTPAEKQM AREVCIAFRQ AVCGFDLLRS EGCSYVCDVN 300
  301 GWSFVKNSYK YYDDAACVLR KMCLDAKAPH LSSTLPPTLP WKVNEPVQSN EGLTRQGSGI 360
  361 IGTFGQSEEL RCVIAVVRHG DRTPKQKVKL KVTEEKLLNL MLKYNGGKPR AETKLKSAVQ 420
  421 LQDLLDATRM LVPRTRPGRE SDSDAEDLEH AEKLRQVKAV LEEGGHFSGI YRKVQLKPLK 480
  481 WVKIPKSDGD GEEERPVEAL MVLKYGGVLT HAGRKQAEEL GRYFRNNMYP GEGTGLLRLH 540
  541 STYRHDLKIY SSDEGRVQMS AAAFAKGLLD LEGQLTPILV SLVSKDSSML DGLDNASIEM 600
  601 EAAKARLNEI VTSGTKMIDD DQVSSEDFPW MTDGAGLPPN AHELLRELVK LTKNVTEQVR 660
  661 LLAMDEDENL TEPYDIIPPY DQAKALGKTN IDSDRIASGL PCGSEGFLLM FARWIKLARD 720
  721 LYNERKDRFD ITQIPDVYDS CKYDLLHNSH LDLKGLDELF KVAQLLADGV IPNEYGINPQ 780
  781 QKLKIGSKIA RRLMGKILID LRNTREEALS VAELKESQEQ VLSLSASQRE DRNSQPKLFI 840
  841 NSDELRRPGT GDKDEDDDKE TKYRLDPKYA NVKTPERHVR TRLYFTSESH IHSLMNVLRY 900
  901 CNLDESLLGE ESLICQNALE RLCKTKELDY MSYIVLRLFE NTEVSLEDPK RFRIELTFSR 960
  961 GADLSPLRNN DDEAETLLRE HTLPIMGPER LQEVGSCLSL ETMEKMVRPF AMPAEDFPPA1020
 1021 STPVGFSGYF SKSAAVLERL VNLFHNYKNS SSNGRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 43.39794 Crystal structure of a lysine biosynthesis enzyme, Lysx, from thermus thermophilus HB8
    2 View Details [335..442] deduced N/A No confident structure predictions are available.
    3 View Details [443..494] MSA 1.219991 View MSA. No confident structure predictions are available.
    4 View Details [495..634] deduced N/A No confident structure predictions are available.
    5 View Details [635..817] deduced N/A No confident structure predictions are available.
    6 View Details [818..971] MSA 1.036974 View MSA. No confident structure predictions are available.
    7 View Details [972..1056] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle