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Protein Overview: gi|30678649, gi|...

General Information:
Name(s) found: gi|30678649 [NCBI NR]
gi|126354926 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|30678649|ref|NP_186920.2| nuclear associated protein-related / NAP-related [Arabidopsis thaliana] [NCBI NR]
  • gi|126354926|gb|ABO09895.1| At3g02710 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 529 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA splicing [ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSNQTRKR KAIDAGHGSQ PTAYRGSDGV DLSLLEALEK SSHNGVEALD LKTLKKLVLS  60
   61 FERRLRDNIA ARLKYVENPE KFADSEVDLH DDLQKLKVLA GAPELYPDLV ASNTVPSIVN 120
  121 LLSHENSDIA NDVVQLLQDL TDEDALEDND EPARVLVDAL VENNVLELLV QNMNRLSEAD 180
  181 PDEATAIYAT LTVIENLVEV KPAVAQLVCE RTKLLRWLLT KIKVREFEGI KQYASEILAI 240
  241 LLQNSTANQK RLGQMNGVDA VLEGVAMYKS KDPKTPDEEE MLENLFDCLC CLLMPLENKE 300
  301 RFVNAEGVEL MIIIMKQKKY AYGSAIRALD FAMTNYPPAC ERFVDVMGLK TAFAAFMGKI 360
  361 PLNKRIKRER YKEELEERVI SLIASLFAGI LRGSRRDRLL SKFVENEFEK IDRLMELYLR 420
  421 YSDRVRSEAE RLDQLELDDL ELDEDEKYNR KLESGLYSLQ LVAVILGHIW CSEHSGMRAR 480
  481 VELLLKQQKL SKTDVKQILQ EYHDNIGDLD GAEEKERGQA RIQLFISAM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..529] FFAS03 0.958 Mouse Importin alpha- phosphorylated SV40 CN peptide complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.96084803796407 bayes_pls_golite062009
  • protein binding
    		•  2.66176697577398 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.957118339467874 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.409399311301148 bayes_pls_golite062009
  • DNA binding
    		•  0.318557071875052 bayes_pls_golite062009
  • transcription activator activity
    		•  0.124587360943091 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle