| Protein: | gi|30678649, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30678649, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
729.0 | [0..25] | [529..76] |
|
Region A: Residues: [1-529] |
1 11 21 31 41 51
| | | | | |
1 MEVSNQTRKR KAIDAGHGSQ PTAYRGSDGV DLSLLEALEK SSHNGVEALD LKTLKKLVLS 60
61 FERRLRDNIA ARLKYVENPE KFADSEVDLH DDLQKLKVLA GAPELYPDLV ASNTVPSIVN 120
121 LLSHENSDIA NDVVQLLQDL TDEDALEDND EPARVLVDAL VENNVLELLV QNMNRLSEAD 180
181 PDEATAIYAT LTVIENLVEV KPAVAQLVCE RTKLLRWLLT KIKVREFEGI KQYASEILAI 240
241 LLQNSTANQK RLGQMNGVDA VLEGVAMYKS KDPKTPDEEE MLENLFDCLC CLLMPLENKE 300
301 RFVNAEGVEL MIIIMKQKKY AYGSAIRALD FAMTNYPPAC ERFVDVMGLK TAFAAFMGKI 360
361 PLNKRIKRER YKEELEERVI SLIASLFAGI LRGSRRDRLL SKFVENEFEK IDRLMELYLR 420
421 YSDRVRSEAE RLDQLELDDL ELDEDEKYNR KLESGLYSLQ LVAVILGHIW CSEHSGMRAR 480
481 VELLLKQQKL SKTDVKQILQ EYHDNIGDLD GAEEKERGQA RIQLFISAM
|
| Detection Method: |  |
| Confidence: | 0.958 |
| Match: | 1q1sC |
| Description: | Mouse Importin alpha- phosphorylated SV40 CN peptide complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.96084803796407 | bayes_pls_golite062009 |
| protein binding | 2.66176697577398 | bayes_pls_golite062009 |
| nucleic acid binding | 0.957118339467874 | bayes_pls_golite062009 |
| transcription regulator activity | 0.409399311301148 | bayes_pls_golite062009 |
| DNA binding | 0.318557071875052 | bayes_pls_golite062009 |
| transcription activator activity | 0.124587360943091 | bayes_pls_golite062009 |
