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Protein Overview: gi|55669683

General Information:
Name(s) found: gi|55669683 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|55669683|pdb|1RZ4|A Chain A, Crystal Structure Of Human Eif3k [NCBI NR]
    • Organism: Homo sapiens
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMFEQXRAN VGKLLKGIDR YNPENLATLE RYVETQAKEN AYDLEANLAV LKLYQFNPAF  60
   61 FQTTVTAQIL LKALTNLPHT DFTLCKCXID QAHQEERPIR QILYLGDLLE TCHFQAFWQA 120
  121 LDENXDLLEG ITGFEDSVRK FICHVVGITY QHIDRWLLAE XLGDLSDSQL KVWXSKYGWS 180
  181 ADESGQIFIC SQEESIKPKN IVEKIDFDSV SSIXASSQLE HHHHHH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|55669683

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] PSI-BLAST 103.0 Crystal Structure of Human eIF3k

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  4.65136805471804 bayes_pls_golite062009
  • binding
    		•  2.27902748675387 bayes_pls_golite062009
  • protein binding
    		•  1.94427330399472 bayes_pls_golite062009
  • RNA cap binding
    		•  1.73309326409609 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.93130370844712 bayes_pls_golite062009
  • structural molecule activity
    		•  0.908029258648777 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.856241051862415 bayes_pls_golite062009
  • translation regulator activity
    		•  0.82193201542158 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.803700928110921 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.742648546865457 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.67795138236883 bayes_pls_golite062009
  • RNA binding
    		•  0.39193569533369 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.10854873707001 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle