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Protein Overview: ORC6_ARATH

General Information:
Name(s) found: ORC6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|84028234|sp|Q9ZVH3.2|ORC6_ARATH RecName: Full=Origin recognition complex subunit 6 [NCBI NR]
  • gi|79353122|ref|NP_174006.2| ORC6 (ORIGIN RECOGNITION COMPLEX PROTEIN 6); DNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|49659274|emb|CAE01430.1| origin recognition complex 6 subunit [Arabidopsis thaliana] [NCBI NR]
  • Origin of replication complex subunit 6 OS=Arabidopsis thaliana GN=ORC6 PE=1 SV=2 [Swiss-Prot]
  • origin recognition complex 6 subunit [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to putative origin recognition complex subunit 6 (ORC6) containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ORC6, ATORC6 | ATORC6/ORC6 (Origin recognition complex protein 6); DNA binding | chr1:9298809-9300590 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Origin recognition complex subunit 6 [nr-271106-contam.fasta]
  • DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ORC6, ATORC6 | origin recognition complex protein 6 | chr1:9298822-9300603 FORWARD LENGTH=284 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Origin recognition complex subunit 6 OS=Arabidopsis thaliana GN=ORC6 PE=1 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: origin recognition complex [ISS]
    Biological Process: DNA replication [ISS]
    Molecular Function: DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISDIGRKL SLDNNKLLIR KAAEIRRLCD AQFDSSIIGV GEICKAVICL EIAATRLQII  60
   61 FDRQAAVKLS GMSEKAYSRS FNSLQNVIGI KIKLNVRELA VQFGCVRVIK SVQNVLSSYK 120
  121 ERFLASLPAS RRANADFTRP VFTAAAFYLC AKKQKLKVDK LRLIEVCGTS ESEFSCVSTS 180
  181 MTDLCFDCVG ISKEKKDAKD VKGNRDLLDV LPGKRRLEDG GYSSGDESSC YKRHKKMEEA 240
  241 KYEDWKSTVV NSIKKNPEKG TKRVIQASLN FPKKSETKEL QVDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] Pfam 40.657577 No description for PF05460.5 was found. No confident structure predictions are available.
    2 View Details [167..284] MSA 2.017991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle