YRC Public Data Repository - Protein Structure Prediction

Protein:	ORC6_ARATH
Organism:	Arabidopsis thaliana
Length:	284 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORC6_ARATH.

Description	E-value	Query Range	Subject Range
gi\|47900696 - gi\|47900696\|gb\|AAT39295.1\| Probable origin recognition complex subunit 6, putative [Solanum demissum...	317.0	[0..1]	[278..1]
ORC6_ORYSJ - Origin of replication complex subunit 6 OS=Oryza sativa subsp. japonica GN=ORC6 PE=3 SV=1	301.0	[0..1]	[284..1]
ORC6_ARATH - (Q9ZVH3) Probable origin recognition complex subunit 6	281.0	[0..1]	[284..1]
HGNC:17151\|MIM:6... - recognition complex, subunit 6 like (yeast) gi\|117646404, gi... - gi\|117646818\|emb\|CAL37524.1\| hypothetical protein [synthetic construct], gi\|117646404\|emb\|CAL38669.1... ORC6L - origin recognition complex, subunit 6 like (yeast)	266.0	[0..3]	[259..6]
gi\|109128387 - gi\|109128387\|ref\|XP_001113625.1\| PREDICTED: similar to origin recognition complex subunit 6 [Macaca ...	266.0	[0..3]	[259..6]
gi\|27658770, gi\|... - gi\|76096324\|ref\|NP_001028862.1\| origin recognition complex, subunit 6 like [Rattus norvegicus], gi\|7...	266.0	[0..3]	[260..6]
gi\|114662327 - gi\|114662327\|ref\|XP_001161833.1\| PREDICTED: origin recognition complex subunit 6 isoform 4 [Pan trog...	266.0	[0..3]	[259..6]
ORC6_BOVIN - Origin recognition complex subunit 6 OS=Bos taurus GN=ORC6 PE=2 SV=1	263.0	[0..3]	[262..6]

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Predicted Domain #1

Region A:
Residues: [1-166]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISDIGRKL SLDNNKLLIR KAAEIRRLCD AQFDSSIIGV GEICKAVICL EIAATRLQII  60
   61 FDRQAAVKLS GMSEKAYSRS FNSLQNVIGI KIKLNVRELA VQFGCVRVIK SVQNVLSSYK 120
  121 ERFLASLPAS RRANADFTRP VFTAAAFYLC AKKQKLKVDK LRLIEV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	40.657577
Match:	PF05460.5
Description:	No description for PF05460.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [167-284]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CGTSESEFSC VSTSMTDLCF DCVGISKEKK DAKDVKGNRD LLDVLPGKRR LEDGGYSSGD  60
   61 ESSCYKRHKK MEEAKYEDWK STVVNSIKKN PEKGTKRVIQ ASLNFPKKSE TKELQVDS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits