YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|40849886

General Information:
Name(s) found: gi|40849886 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|40849886|gb|AAR95655.1| plectin 1 [Rattus norvegicus] [NCBI NR]
  • plectin 1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Plectin 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Plectin 1 OS=Rattus norvegicus GN=Plec [011711_HMR.fasta]
  • Isoform of P30427, Plectin OS=Rattus norvegicus GN=Plec PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 4574 amino acids

    Gene Ontology:
    Cellular Component: insoluble fraction [UNKNOWN]
    basal plasma membrane [IDA]
    cytoskeleton [IEA]
    contractile fiber [UNKNOWN]
    perinuclear region of cytoplasm [IDA]
    cytoplasm [IEA]
    sarcolemma [IDA]
    cytosol [UNKNOWN]
    apical plasma membrane [IDA]
    Biological Process: epithelial cell differentiation [IEP]
    hemidesmosome assembly [UNKNOWN]
    female pregnancy [IEP]
    response to nutrient [IDA]
    Molecular Function: actin binding [IEA]
    protein N-terminus binding [IDA]
    structural constituent of cytoskeleton [IMP]
    cytoskeletal protein binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGEDSEVRP VAVAEGSSNG SSGSPSPGDT LPWNLGKTQR SRRSGGGSVG NGSVLDPAER  60
   61 AVIRIADERD RVQKKTFTKW VNKHLIKAQR HISDLYEDLR DGHNLISLLE VLSGDSLPRE 120
  121 KGRMRFHKLQ NVQIALDYLR HRQVKLVNIR NDDIADGNPK LTLGLIWTII LHFQISDIQV 180
  181 SGQSEDMTAK EKLLLWSQRM VEGYQGLRCD NFTTSWRDGR LFNAIIHRHK PMLIDMNKVY 240
  241 RQTNLENLDQ AFSVAERDLG VTRLLDPEDV DVPQPDEKSI ITYVSSLYDA MPRVPGAQDG 300
  301 VRANELQLRW QEYRELVLLL LQWIRHHTAA FEERKFPSSF EEIEILWCQF LKFKETELPA 360
  361 KEADKNRSKG IYQSLEGAVQ AGQLKIPPGY HPLDVEKEWG KLHVAILERE KQLRSEFERL 420
  421 ECLQRIVSKL QMEAGLCEEQ LNQADSLLQS QDIRLLASGK AAQRAGEVER DLDKADGMIR 480
  481 LLFNDVQTLK DGRHPQGEQM YRRVYRLHER LVAIRTEYNL RLKAGVGAPV TQVTLQSTQR 540
  541 RPELEDSTLR YLHDLLAWVE ENQRRIDGAE WGVDLPSVEA QLGSHRGMHQ SIEEFRAKIE 600
  601 RARNDESQLS PATRGAYRDC LGRLDLQYAK LLNSSKARLR SLESLHGFVA AATKELMWLN 660
  661 EKEEEEVGFD WSDRNTNMAA KKESYSALMR ELEMKEKKIK EIQNTGDRLL REDHPARPTV 720
  721 ESFQAALQTQ WSWMLQLCCC IEAHLKENTA YFQFFSDVRE AEEQLQKLQE TLRRKYSCDR 780
  781 SITVTRLEDL LQDAQDEKEQ LNEYKGHLSG LAKRAKAIVQ LKPRNPAHPV RGHVPLLAVC 840
  841 DYKQVEVTVH KGDQCQLVGP AQPFHWKVLG GSSSEAAVPS VCFLVPPPNQ EAQEAVARLE 900
  901 AQHQALVTLW HQLHVDMKSL LAWQSLNRDI QLIRSWSLVT FRTLKPEEQR QALRNLELHY 960
  961 QAFLRDSQDA GGFGPEDRLV AEREYGSCSR HYQQLLQSLE QGEQEESRCQ RCISELKDIR1020
 1021 LQLEACETRT VHRLRLPLDK DPARECAQRI AEQQKAQAEV EGLGKGVARL SAEAEKVLAL1080
 1081 PEPSPAAPTL RSELELTLGK LEQVRSLSAI YLEKLKTISL VIRSTQGAEE VLKTHEEHLK1140
 1141 EAQAVPATLQ ELEVTKASLK KLRAQAEAQQ PVFNTLRDEL RGAQEVGERL QQRHGERDVE1200
 1201 VERWRERVTQ LLERWQAVLA QTDVRQRELE QLGRQLRYYR ESADPLSSWL QDAKSRQEQI1260
 1261 QAVPIANSQA AREQLRQEKA LLEEIERHGE KVEECQKFAK QYINAIKDYE LQLITYKAQL1320
 1321 EPVASPAKKP KVQSGSESVI QEYVDLRTRY SELTTLTSQY IKFISETLRR MEEEERLAEQ1380
 1381 QRAEERERLA EVEAALEKQR QLAEAHAQAK AQAELEAREL QRRMQEEVTR REEAAVDAQQ1440
 1441 QKRSIQEELQ HLRQSSEAEI QAKAQQVEAA ERSRMRIEEE IRVVRLQLET TERQRGGAED1500
 1501 ELQALRARAE EAEAQKRQAQ EEAERLRRQV QDESQRKRQA EAELALRVKA EAEAAREKQR1560
 1561 ALQALDELKL QAEEAERRLR QAEAERARQV QVALETAQRS AEVELQSKRA SFAEKTAQLE1620
 1621 RTLQEEHVTV TQLREEAERR AQQQAEAERA REEAERELER WQLKANEALR LRLQAEEVAQ1680
 1681 QKSLAQADAE KQKEEAEREA RRRGKAEEQA VRQRELAEQE LEKQRQLAEG TAQQRLAAEQ1740
 1741 ELIRLRAETE QGEQQRQLLE EELARLQHEA TAATQKRQEL EAELAKVRAE MEVLLASKAR1800
 1801 AEEESRSTSE KSKQRLEAEA GRFRELAEEA ARLRALAEEA KRQRQLAEED AARQRAEAER1860
 1861 VLTEKLAAIS EATRLKTEAE IALKEKEAEN ERLRRLAEDE AFQRRRLEEQ AAQHKADIEE1920
 1921 RLAQLRKASE SELERQKGLV EDTLRQRRQV EEEIMALKAS FEKAAAGKAE LELELGRIRS1980
 1981 NAEDTMRSKE LAEQEAARQR QLAAEEEQRR REAEERVQRS LAAEEEAARQ RKVALEEVER2040
 2041 LKAKVEEARR LRERAEQESA RQLQLAQEAA QKRLQAEEKA HAFVVQQREE ELQQTLQQEQ2100
 2101 NMLERLRSEA EAARRAAEEA EEAREQAERE AAQSRKQVEE AERLKQSAEE QAQAQAQAQA2160
 2161 AAEKLRKEAE QEAARRAQAE QAALKQKQAA DAEMEKHKKF AEQTLRQKAQ VEQELTTLRL2220
 2221 QLEETDHQKS ILDEELQRLK AEVTEAARQR SQVEEELFSV RVQMEELGKL KARIEAENRA2280
 2281 LILRDKDNTQ RFLEEEAEKM KQVAEEAARL SVAAQEAARL RQLAEEDLAQ QRALAEKMLK2340
 2341 EKMQAVQEAT RLKAEAELLQ QQKELAQEQA RRLQEDKEQM AQQLVEETQG FQRTLEAERQ2400
 2401 RQLEMSAEAE RLKLRMAEMS RAQARAEEDA QRFRKQAEEI GEKLHRTELA TQEKVTLVQT2460
 2461 LEIQRQQSDQ DAERLREAIA ELEREKEKLK QEAKLLQLKS EEMQTVQQEQ ILQETQALQK2520
 2521 SFLSEKDSLL QRERFIEQEK AKLEQLFQDE VAKAKQLQEE QQRQQQQMEQ EKQELVASME2580
 2581 EARRRQREAE EGVRRKQEEL QRLEQQRQQQ EKLLAEENQR LRERLQRLEE EHRAALAHSE2640
 2641 EIATSQAAAT KALPNGRDAL DGPSMEAEPE YTFEGLRQKV PAQQLQEAGI LSMEELQRLT2700
 2701 QGHTTVAELT QREDVHRYLK GGSSIAGLLL KPTNEKLSVY TALQRQLLSP GTALILLEAQ2760
 2761 AASGFLLDPV RNRRLTVNEA VKEGVVGPEL HHKLLSAERA VTGYKDPYTG EQISLFQAMK2820
 2821 KDLIVRDHGI RLLEAQIATG GIIDPVHSHR VPVDVAYQRG YFDEEMNRVL ADPSDDTKGF2880
 2881 FDPNTHENLT YLQLLERCVE DPETGLRLLP LTDKAAKGGE LVYTDTEARD VFEKATVSAP2940
 2941 FGKFQGKTVT IWEIINSEYF TAEQRRDLLR QFRTGRITVE KIIKIVITVV EEHERKGQLC3000
 3001 FEGLRALVPA AELLDSGVIS HEVYQQLQRG ERSVREVAEA DEVRQALRGT SVIAGVWLEE3060
 3061 AGQKLSIYEA LRRDLLQPEV AVALLEAQAG TGHIIDPATS ARLTVDEAVR AGLVGPEMHE3120
 3121 KLLSAEKAVT GYRDPYSGQS VSLFQALKKG LIPREQGLRL LDAQLSTGGI VDPSKSHRVP3180
 3181 LDVAYARGYL DKETNRALTS PRDDARVYLD PSTREPVTYS QLQQRCRSDQ LTGLSLLPLS3240
 3241 EKAVRARQEE VYSELQARET LEKAKVEVPV GGFKGRALTV WELISSEYFT EEQRQELLRQ3300
 3301 FRTGKVTVEK VIKILITIVE EVETQRQERL SFSGLRAPVP ASELLASKIL SRTQFEQLKD3360
 3361 GKTSVKDLSE VGSVRTLLQG SGCLAGIYLE DSKEKVTIYE AMRRGLLRPS TATLLLEAQA3420
 3421 ATGFLVDPVR NQRLYVHEAV KAGVVGPELH EKLLSAEKAV TGYKDPYSGS TISLFQAMKK3480
 3481 GLVLRDHAIR LLEAQIATGG IIDPVHSHRL PVDVAYQRGY FDEEMNRVLA DPSDDTKGFF3540
 3541 DPNTHENLTY LQLLERCVED PETGLRLLPL RGAEKTEVVE TTQVYTEEET RRAFEETQID3600
 3601 IPGGGSHGGS SMSLWEVMQS DMIPEDQRAR LMADFQAGRV TKERMIIIII EIIEKTEIIR3660
 3661 QQNLASYDYV RRRLTAEDLY EARIISLETY NLFREGTKSL REVLEMESAW RYLYGTGSVA3720
 3721 GVYLPGSRQT LTIYQALKKG LLSAEVARLL LEAQAATGFL LDPVKGERLT VDEAVRKGLV3780
 3781 GPELHDRLLS AERAVTGYRD PYTEQPISLF QAMKKELIPA EEALRLLDAQ LATGGIVDPR3840
 3841 LGFHLPLEVA YQRGYLNKDT HDQLSEPSEV RSYVDPSTDE RLSYTQLLKR CRRDDNSGQM3900
 3901 LLPLSDARKL TFRGLRKQIT VEELVRSQVM DEATALQLQE GLTSIEEVTK NLQKFLEGTS3960
 3961 CIAGVFVDAT KERLSVYQAM KKGIIRPGTA FELLEAQAAT GYVIDPIKGL KLTVEEAVRM4020
 4021 GIVGPEFKDK LLSAERAVTG YKDPYSGKLI SLFQAMKKGL ILKDHGIRLL EAQIATGGII4080
 4081 DPEESHRLPV EVAYKRGLFD EEMNEILTDP SDDTKGFFDP NTEENLTYLQ LMERCITDPQ4140
 4141 TGLCLLPLKE KKRERKTSSK SSVRKRRVVI VDPETGKEMS VYEAYRKGLI DHQTYLELSE4200
 4201 QECEWEEITI SSSDGVVKSM IIDRRSGRQY DIDDAITKNL IDRSALDQYR AGTLSITEFA4260
 4261 DMLSGNAGGF RSRSSSVGSS SSYPISSAVP RTQLASWSDP TEETGPVAGI LDTETLEKVS4320
 4321 ITEAMHRNLV DNITGQRLLE AQACTGGIID PSTGERFPVT EAVNKGLVDK IMVDRINLAQ4380
 4381 KAFCGFEDPR TKTKMSAAQA LKKGWLYYEA GQRFLEVQYL TGGLIEPDTP GRVSLDEALQ4440
 4441 RGTVDARTAQ KLRDVSAYSK YLTCPKTKLK ISYKDALDRS MVEEGTGLRL LEAAAQSSKG4500
 4501 YYSPYSVSGS GSTAGSRTGS RTGSRAGSRR GSFDATGSGF SMTFSSSSYS SSGYGRRYAS4560
 4561 GPSASLGGPE SAVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle