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Protein Overview: GLR27_ARATH

General Information:
Name(s) found: GLR27_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79565702|ref|NP_180476.3| ATGLR2.7; intracellular ligand-gated ion channel [Arabidopsis thaliana] [NCBI NR]
  • gi|40557616|gb|AAR88101.1| putative glutamate receptor ion channel [Arabidopsis thaliana] [NCBI NR]
  • gi|148877234|sp|Q8LGN0.3|GLR27_ARATH RecName: Full=Glutamate receptor 2.7; AltName: Full=Ligand-gated ion channel 2.7; Flags: Precursor [NCBI NR]
  • Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3 [Swiss-Prot]
  • putative glutamate receptor ion channel [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to glutamate receptor family protein (GLR2.8) (GLUR9) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GLR2.7, ATGLR2.7 | ATGLR2.7 (Arabidopsis thaliana glutamate receptor 2.7) | chr2:12518556-12522970 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATGLR2.7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 952 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    Biological Process: response to light stimulus [NAS]
    cellular calcium ion homeostasis [NAS]
    Molecular Function: intracellular ligand-gated ion channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN  60
   61 ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK NEQVSAIIGP RTSMQAEFMI 120
  121 RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD 180
  181 NEFGEGILPL LTDALQDVQA FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL 240
  241 GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN 300
  301 FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG 360
  361 TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD VINIIGSEER IIGLWRPSNG 420
  421 IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI 480
  481 DPISNAMTPT GYCIEIFEAV LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD 540
  541 VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV 600
  601 WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS 660
  661 YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR ELLKSQGFDE SQLKPFGSAV 720
  721 ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR 780
  781 AILNVTQGEE MQHIENKWFK KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF 840
  841 VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP 900
  901 LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..548] PSI-BLAST 54.522879 No description for 2e4uA was found.
    2 View Details [549..622] MSA 3.562995 View MSA. No confident structure predictions are available.
    3 View Details [623..871] PSI-BLAST 24.69897 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
    4 View Details [872..952] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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