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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR27_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.48
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN  60
   61 ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK NEQVSAIIGP RTSMQAEFMI 120
  121 RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD 180
  181 NEFGEGILPL LTDALQDVQA FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL 240
  241 GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN 300
  301 FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG 360
  361 TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD VINIIGSEER IIGLWRPSNG 420
  421 IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI 480
  481 DPISNAMTPT GYCIEIFEAV LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD 540
  541 VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV 600
  601 WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS 660
  661 YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR ELLKSQGFDE SQLKPFGSAV 720
  721 ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR 780
  781 AILNVTQGEE MQHIENKWFK KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF 840
  841 VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP 900
  901 LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle