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Protein Overview: gi|23200230

General Information:
Name(s) found: gi|23200230 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|23200230|pdb|1K4N|A Chain A, Structural Genomics, Protein Ec4020 [NCBI NR]
    • Organism: Escherichia coli
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHXIXANWQS IDELQDIASD LPRFIHALDE LSRRLGLNIT PLTADHISLR CHQNATAERW  60
   61 RRGFEQCGEL LSENXINGRP ICLFKLHEPV QVAHWQFSIV ELPWPGEKRY PHEGWEHIEI 120
  121 VLPGDPETLN ARALALLSDE GLSLPGISVK TSSPKGEHER LPNPTLAVTD GKTTIKFHPW 180
  181 SIEEIVASEQ SA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|23200230

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 83.522879 Hypothetical protein YecM (EC4020)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.451352729218579 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle