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Protein Overview: gi|6730263, gi|6...

General Information:
Name(s) found: gi|6730268 [NCBI NR]
gi|6730267 [NCBI NR]
gi|6730266 [NCBI NR]
gi|6730265 [NCBI NR]
gi|6730264 [NCBI NR]
gi|6730263 [NCBI NR]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • gi|6730268|pdb|1D8I|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With A Sulfate Ion [NCBI NR]
  • gi|6730267|pdb|1D8I|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With A Sulfate Ion. [NCBI NR]
  • gi|6730266|pdb|1D8I|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With A Sulfate Ion. [NCBI NR]
  • gi|6730265|pdb|1D8H|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With Sulfate And Manganese Ions. [NCBI NR]
  • gi|6730264|pdb|1D8H|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With Sulfate And Manganese Ions. [NCBI NR]
  • gi|6730263|pdb|1D8H|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In Complex With Sulfate And Manganese Ions. [NCBI NR]
    • Organism: Saccharomyces cerevisiae
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HMYRNVPIWA QKWKPTIKAL QSINVKDLKI DPSFLNIIPD DDLTKSVQDW VYATIYSIAP  60
   61 ELRSFIELEM KFGVIIDAKG PDRVNPPVSS QCVFTELDAH LTPNIDASLF KELSKYIRGI 120
  121 SEVTENTGKF SIIESQTRDS VYRVGLSTQR PRFLRMSTDI KTGRVGQFIE KRHVAQLLLY 180
  181 SPKDSYDVKI SLNLELPVPD NDPPEKYKSQ SPISERTKDR VSYIHNDSCT RIDITKVENH 240
  241 NQNSKSRQSE TTHEVELEIN TPALLNAFDN ITNDSKEYAS LIRTFLNNGT IIRRKLSSLS 300
  301 YEIFEGSKKV M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 114.0 mRNA triphosphatase CET1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • polynucleotide 5'-phosphatase activity
    		•  11.2864202061301 bayes_pls_golite062009
  • nucleotide phosphatase activity
    		•  5.10806075014632 bayes_pls_golite062009
  • binding
    		•  1.32114964285132 bayes_pls_golite062009
  • catalytic activity
    		•  1.17990683373825 bayes_pls_golite062009
  • hydrolase activity
    		•  0.487109994827608 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle