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Protein Overview: gi|6730070, gi|6...

General Information:
Name(s) found: gi|6730073 [NCBI NR]
gi|6730072 [NCBI NR]
gi|6730071 [NCBI NR]
gi|6730070 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|6730073|pdb|1B12|D Chain D, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor [NCBI NR]
  • gi|6730072|pdb|1B12|C Chain C, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor [NCBI NR]
  • gi|6730071|pdb|1B12|B Chain B, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor [NCBI NR]
  • gi|6730070|pdb|1B12|A Chain A, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor [NCBI NR]
    • Organism: Escherichia coli
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRSFIYEPFQ IPSGSMMPTL LIGDFILVEK FAYGIKDPIY QKTLIETGHP KRGDIVVFKY  60
   61 PEDPKLDYIK RAVGLPGDKV TYDPVSKELT IQPGCSSGQA CENALPVTYS NVEPSDFVQT 120
  121 FSRRNGGEAT SGFFEVPKNE TKENGIRLSE RKETLGDVTH RILTVPIAQD QVGMYYQQPG 180
  181 QQLATWIVPP GQYFMMGDNR DNSADSRYWG FVPEANLVGR ATAIWMSFDK QEGEWPTGLR 240
  241 LSRIGGIH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|6730070, gi|6...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 62.522879 Type 1 signal peptidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  0.485843348899278 bayes_pls_golite062009
  • catalytic activity
    		•  0.415601732277814 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.237734983138449 bayes_pls_golite062009
  • hydrolase activity
    		•  0.188292586303013 bayes_pls_golite062009
  • protein binding
    		•  0.0579980138351139 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle