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Protein Overview: gi|5107488, gi|5...

General Information:
Name(s) found: gi|5107490 [NCBI NR]
gi|5107489 [NCBI NR]
gi|5107488 [NCBI NR]
gi|5107487 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|5107490|pdb|1BDF|D Chain D, Structure Of Escherichia Coli Rna Polymerase Alpha Subunit N-Terminal Domain [NCBI NR]
  • gi|5107489|pdb|1BDF|C Chain C, Structure Of Escherichia Coli Rna Polymerase Alpha Subunit N-Terminal Domain [NCBI NR]
  • gi|5107488|pdb|1BDF|B Chain B, Structure Of Escherichia Coli Rna Polymerase Alpha Subunit N-Terminal Domain [NCBI NR]
  • gi|5107487|pdb|1BDF|A Chain A, Structure Of Escherichia Coli Rna Polymerase Alpha Subunit N-Terminal Domain [NCBI NR]
    • Organism: Escherichia coli
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGSVTEFLK PRLVDIEQVS STHAKVTLEP LERGFGHTLG NALRAILLSS MPGCAVTEVE  60
   61 IDGVLHEYST KEGVQEDILE ILLNLKGLAV RVQGKDEVIL TLNKSGIGPV TAADITHDGD 120
  121 VEIVKPQHVI CHLTDENASI SMRIKVQRGR GYVPASTRIH SEEDERPIGR LLVDACYSPV 180
  181 ERIAYNVEAA RVEQRTDLDK LVIEMETNGT IDPEEAIRRA ATILAEQLEA FVDLR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|5107488, gi|5...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] PSI-BLAST 78.69897 RNA polymerase alpha; RNA polymerase alpha subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.619856985357098 bayes_pls_golite062009
  • transferase activity
    		•  0.03905230593655 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle