Protein Overview: gi|157829635, gi...

General Information:
Name(s) found:	gi\|2981658 [NCBI NR] gi\|157829635 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|2981658\|pdb\|1A0P\| Chain , Site-Specific Recombinase, Xerd [NCBI NR] gi\|157829635\|pdb\|1A0P\|A Chain A, Site-Specific Recombinase, Xerd [NCBI NR]
Organism:	Escherichia coli
Length:	290 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDLARIEQFL DALWLEKNLA ENTLNAYRRD LSMMVEWLHH RGLTLATAQS DDLQALLAER  60
   61 LEGGYKATSS ARLLSAVRRL FQYLYREKFR EDDPSAHLAS PKLPQRLPKD LSEAQVERLL 120
  121 QAPLIDQPLE LRDKAMLEVL YATGLRVSEL VGLTMSDISL RQGVVRVIGK GNKERLVPLG 180
  181 EEAVYWLETY LEHGRPWLLN GVSIDVLFPS QRAQQMTRQT FWHRIKHYAV LAGIDSEKLS 240
  241 PHVLRHAFAT HLLNHGADLR VVQMLLGHSD LSTTQIYTHV ATERLRQLHQ

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Noble WS, et al. (2009) Manuscript in preparation.		FDNI_ECOLI LGUL_ECOLI NFSA_ECOLI PDXK_ECOLI YRAO_ECOLI, DIAA... gi\|134105085, gi... gi\|157829635, gi... gi\|189095939, gi... gi\|215794768 gi\|60594470, gi\|...

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
site-specific recombinase activity	4.99325011803106	bayes_pls_golite062009
integrase activity	3.60695091575172	bayes_pls_golite062009
catalytic activity	2.22520758916604	bayes_pls_golite062009
structure-specific DNA binding	0.11292854906722	bayes_pls_golite062009
DNA binding	0.10970863758177	bayes_pls_golite062009
nucleic acid binding	0.06580979261817	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..290]	PSI-BLAST	59.0	SITE-SPECIFIC RECOMBINASE, XERD

Protein Overview: gi|157829635, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: