YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|3212494, gi|1...

General Information:
Name(s) found: gi|3212494 [NCBI NR]
gi|157830162 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|3212494|pdb|1AZO| Chain , Dna Mismatch Repair Protein Muth From E. Coli [NCBI NR]
  • gi|157830162|pdb|1AZO|A Chain A, Dna Mismatch Repair Protein Muth From E. Coli [NCBI NR]
  • Dna Mismatch Repair Protein Muth From E. Coli [nrdb_11152004_Chlamydomonas]
  • Chain , Dna Mismatch Repair Protein Muth From E. Coli [nr-271106-contam.fasta]
    • Organism: Escherichia coli
    Length: 232 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHMSQPRPL LSPPETEEQL LAQAQQLSGY TLGELAALVG LVTPENLKRD KGWIGVLLEI  60
   61 WLGASAGSKP EQDFAALGVE LKTIPVDSLG RPLETTFVCV APLTGNSGVT WETSHVRHKL 120
  121 KRVLWIPVEG EASIPLAQRR VGSPLLWSPN EEEDRQLRED WEELXDXIVL GQVERITARH 180
  181 GEYLQIRPKA ANAKALTEAI GARGERILTL PRGFYLKKNF TSALLARHFL IQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|3212494, gi|1...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 112.0 DNA mismatch repair protein MutH from

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • double-stranded DNA binding
    		•  4.65596322324967 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  3.88121538069074 bayes_pls_golite062009
  • single-stranded DNA specific endodeoxyribonuclease activity
    		•  3.87045877570028 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  3.62965779224499 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  2.01277239394854 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.99560174672253 bayes_pls_golite062009
  • nuclease activity
    		•  1.92659045080864 bayes_pls_golite062009
  • endonuclease activity
    		•  1.6546965422816 bayes_pls_golite062009
  • damaged DNA binding
    		•  1.50475020123562 bayes_pls_golite062009
  • hydrolase activity
    		•  1.18004254197954 bayes_pls_golite062009
  • binding
    		•  0.940513659936693 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.878597940882332 bayes_pls_golite062009
  • catalytic activity
    		•  0.816447099398022 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.796780585758145 bayes_pls_golite062009
  • DNA binding
    		•  0.779318309058729 bayes_pls_golite062009
  • protein binding
    		•  0.458550636208588 bayes_pls_golite062009
  • DNA strand annealing activity
    		•  0.103710151681167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle