| Protein: | gi|2555191, gi|2... |
| Organism: | Mus musculus |
| Length: | 271 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2555191, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..3] | [268..70] |
|
|
311.0 | [0..3] | [268..70] |
|
|
311.0 | [0..3] | [268..62] |
|
|
310.0 | [0..3] | [268..70] |
|
Region A: Residues: [1-271] |
1 11 21 31 41 51
| | | | | |
1 MGAGRAPWVV ALLVNLMRLD SFMIEGRDSP ENFVIQAKAD CYFTNGTEKV HLLVRFIFNL 60
61 EEYLHFDSDL GMFVALTELG EPDADQWNKR LDLLETSRAA VNMVCRQKYK LGAPFTVERN 120
121 VPPEVTVYPE RTPLLQQHNL LLCSVTGFYP GDISVKWFRN GQEERSGVMS TGLVRNGDWT 180
181 FQTTVMLEMI PELGDIYSCL VEHPGLLRPV SVAWMAQSEY SWKKILSGAA VFLLGLIVFL 240
241 VGVVIHLKAQ KASVETQPGN EASRESLHSQ P
|
| Detection Method: |  |
| Confidence: | 51.30103 |
| Match: | 1d5xB |
| Description: | Class II MHC beta chain, C-terminal domain; Class II MHC beta chain, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptide antigen binding | 5.63215326620472 | bayes_pls_golite062009 |
| lipid antigen binding | 4.82286265971588 | bayes_pls_golite062009 |
| olfactory receptor activity | 4.58024710763591 | bayes_pls_golite062009 |
| endogenous lipid antigen binding | 4.51527410976673 | bayes_pls_golite062009 |
| receptor activity | 3.59560861549375 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.56598292218135 | bayes_pls_golite062009 |
| MHC class I receptor activity | 3.46497995701625 | bayes_pls_golite062009 |
| molecular transducer activity | 3.44808015198907 | bayes_pls_golite062009 |
| signal transducer activity | 3.44808015198907 | bayes_pls_golite062009 |
| antigen binding | 2.27076537618453 | bayes_pls_golite062009 |
| binding | 2.11682283742138 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 2.02925074238378 | bayes_pls_golite062009 |
| protein binding | 1.1543566056559 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.13521590137244 | bayes_pls_golite062009 |
| exogenous lipid antigen binding | 0.763929387638141 | bayes_pls_golite062009 |
| IgG binding | 0.66334714003323 | bayes_pls_golite062009 |
| peptide binding | 0.59586638906248 | bayes_pls_golite062009 |
| receptor binding | 0.46037337468987 | bayes_pls_golite062009 |
| MHC class II receptor activity | 0.251167772391909 | bayes_pls_golite062009 |
| hydrolase activity | 0.206657304371779 | bayes_pls_golite062009 |
| catalytic activity | 0.115804452291889 | bayes_pls_golite062009 |
