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View Structure Prediction Details

Protein: CG8036-PC, CG8036-PB
Organism: Drosophila melanogaster
Length: 626 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8036-PC, CG8036-PB.

Description E-value Query
Range
Subject
Range
gi|168826063, gi... - gi|32029978|ref|ZP_00132914.1| COG0021: Transketolase [Haemophilus somnus 2336], gi|170717934|ref|YP...
574.0 [0..15] [624..5]

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Predicted Domain #1
Region A:
Residues: [1-626]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYHKPEAKT VQDLKDLAQK LRIHSINATQ ASKSGHPTSC ASIAEIMSVL FFQQLRLNLK  60
   61 HPRDPSSDRF ILSKGHAAPI LYAAWAEAGL FPIADLNNLR KIDSDLEGHP TPRLNFIDVG 120
  121 TGSLGQGVAV GAGMAYVGKN FDKADYRTYV VVGDGESAEG SIWESLHFAG HYKLDNLCVI 180
  181 FDVNRLGQSE ATSLQHKLDV YRDRLEAFGF NAVVVDGHDV EELSKAFHCA AITKNKPTAI 240
  241 IAKTFKGRDF PNIEDLDNWH GKPLGDKAAE VVKHLEGLIV NKNVKLTPKP VPKTGAAPDV 300
  301 DINNIKLSSP PAYKLGDSIA TRLAYGTALA KIGQNNLRVV ALDGDTKNST FSDKLKNLDP 360
  361 QRYIECFIAE QNLVGVAVGA ACRRRTVAFV STFATFFTRA FDQIRMGAIS QTNVNFVGSH 420
  421 CGCSIGEDGP SQMGLEDIAM FRTIPGSTIF YPSDAVSTER AVELAANTKG VCFIRTSRPN 480
  481 TCVIYDNEEP FTIGRGKVVR QKSSDEVLLI GAGITLYECL AAADQLEKNC ITVRVIDPFT 540
  541 VKPLDAELII EHGKQCGGRV VVVEDHYQQG GLGEAVLSAL AGERNFVVKH LYVPTVPRSG 600
  601 PPSVLIDMFG ISARHVVNAV NEILKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 162.0
Match: 1qgdA
Description: Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transketolase activity 6.17852985073866 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 2.93250853993668 bayes_pls_golite062009
pyruvate dehydrogenase activity 2.81702263447118 bayes_pls_golite062009
pyruvate dehydrogenase (acetyl-transferring) activity 2.6977837113283 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 2.21959520697519 bayes_pls_golite062009
binding 0.980920092099572 bayes_pls_golite062009
catalytic activity 0.545407789079971 bayes_pls_golite062009
thiamin pyrophosphate binding 0.297191393111081 bayes_pls_golite062009
acetolactate synthase activity 0.173822256668691 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle