| Protein: | Sas-4-PA |
| Organism: | Drosophila melanogaster |
| Length: | 901 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sas-4-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
363.0 | [0..4] | [875..1839] |
|
Region A: Residues: [1-329] |
1 11 21 31 41 51
| | | | | |
1 MQEAGESPVG MPLSQEAIAQ RLAALSRWQD EQKRLLQERQ SNHRVLLGLE QRNMYKMLGL 60
61 LHQETESHEN SVLEEWDEEH SIQMPRLAAD PDEHEPEISM ADPQPAKPKR PFLRRGEGLK 120
121 QRFKINPDQL RLENLPRYKF ANAHPQFRTP QMKKGILKKQ VKSPPNPAPP PAPKPSAQLD 180
181 DLNEQRFQQM LIGKNACSST PDLKSSYASS TTASSTSPRV RFVEQKSRAG QTTHADDEAS 240
241 SEASPMTGVC WAKVLDTQSI KPAQIQRRSA QIRVEDDSNV SIFELLEQKA TEGNIDMNSS 300
301 CIRTFMARKD QRRRVADDSD HIVVTQQVR
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [330-609] |
1 11 21 31 41 51
| | | | | |
1 QMRLQPQVDQ MLVQELQEGD EEDTEPSSDQ TLTMTPIQVG NTKVRVRFSD SNDTHEYSDA 60
61 TSLNDGSNIQ LFEQFKSALF QALEQKKKSS PSKESDEPIT KDLQEKANLV RTRLEELETE 120
121 IATFKEQNAQ LLRLRQQHEL EKAKCTQDHM EAMERVHDEK IQAEIYLHDE RMKIEEERRK 180
181 FEQQMRLQKS NANSKEKKEI AALKQEVEGL QLQLKQKEQA HVSAQARLRA QLRASEKEQR 240
241 NYRDEIELLR KENKRLEQEL VKIGRENNSK MLQEINRNIA
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [610-811] |
1 11 21 31 41 51
| | | | | |
1 RLAPKVLPSA TMSDILDENG RRTQSLDGTA GKPAKQREAQ NRRQSSGSAQ VRSRSRSLSR 60
61 NKKTPYALDE SYASSSSVES EEVQPPVTAP KAATPPPAAN SSSDFKREIT NADGSKDIWY 120
121 PNGNLKKISA DGMNLRMLYF NKDIKETNIR EGTVKYYYAE TNTWHTSYLD GLEILEFPNG 180
181 QTEHRRKDGT VEIHFPNNSI KI
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
| Term | Confidence | Notes |
| binding | 2.45058468282438 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.1457670954804 | bayes_pls_golite062009 |
| actin binding | 1.48871115327078 | bayes_pls_golite062009 |
| transcription regulator activity | 1.38505016881116 | bayes_pls_golite062009 |
| DNA binding | 1.29464499177454 | bayes_pls_golite062009 |
| nucleic acid binding | 1.27419374347122 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.13700925407906 | bayes_pls_golite062009 |
| protein binding | 1.03780839342631 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.88156363379437 | bayes_pls_golite062009 |
| transcription factor activity | 0.694399096428821 | bayes_pls_golite062009 |
| actin filament binding | 0.26311995282891 | bayes_pls_golite062009 |
|
Region A: Residues: [812-901] |
1 11 21 31 41 51
| | | | | |
1 VDPSDTEKLE EWRYADGTHL VQLRNGDKIL NLPNGQKEIH TKLNKRREYP DGTVKLVYPD 60
61 GSQETRYSNG RVRLKDKDGK LIMDTDYAKY
|
| Detection Method: | |
| Confidence: | 21.744727 |
| Match: | PF07202.4 |
| Description: | No description for PF07202.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
