YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG9517-PA
Organism: Drosophila melanogaster
Length: 865 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9517-PA.

Description E-value Query
Range
Subject
Range
gi|118780676, gi... - gi|118780676|ref|XP_310332.5| ENSANGP00000024305 [Anopheles gambiae str. PEST], gi|116130972|gb|EAA4...
736.0 [0..175] [858..40]

Back

Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEISQQQN QQHQQHQQHQ QQQLPHHKRQ PQRKSFSGIS TTNQPIYTPT SHLSTSSSSI  60
   61 NTNDYSHNNT SNNNNNNQNY RLRHKYNLSK QTYERSKIAA SSASTSQSDT DSHYAKLNLQ 120
  121 RSSSQSSDSG IYNSSCHCSS ISSISAVSSS ASSSRSSSSS SRGCPSSVVS SKSNRSLDKQ 180
  181 KHYLSHHLYI KSYLDILEED ERARAHFKSA RPGGIRNYTP KILASGESSL SGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.045757
Match: 1epwA
Description: Botulinum neurotoxin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [234-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTNTALSSS APAHCYGPGK RTTVGGTSGS GGAAGATGTG AQGTDPVDPE NKVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [288-865]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPTVIRRQYD FVVIGGGSAG AVVANRLSEV RNWTVLLLEA GGDETEISDV PALAGYLQLT  60
   61 ELDWKYQTTP SSTRQYCQAM KGDRCFWPRG KVLGGSSVLN AMVYVRGSKN DYNHWASLGN 120
  121 PGWDYDSMLK YFLKSEDVRN PYLAKTPYHE TGGYLTVQEA PWRTPLSIAF LQAGIEMGYE 180
  181 NRDINGAQQT GFMLTQSTIR RGARCSTGKA FIRPVRQRKN FDVLLHAEAT RILFDKQKRA 240
  241 IGVEYMRGGR KNVVFVRREV IASAGALNTP KLLMLSGVGP AEHLQEHNIP VISDLPVGNN 300
  301 MQDHVGLGGL TFVVDAPLTV TRNRFQTIPV SMEYILRERG PMTFSGVEGV AFLNTKYQDP 360
  361 SVDWPDVQFH FCPSSINSDG GEQIRKILNL RDGFYNTVYK PLQHSETWSI LPLLLRPKST 420
  421 GWVRLNSRNP QHQPKIIPNY FAHQEDIDVL VEGIKLAINV SNTQAFQRFG SRLHNIPLPG 480
  481 CRHLPFQSNE YWACCIKEFT FTIYHPAGTC RMGPSWDVTA VVDPRLRVYG VSGVRVVDAS 540
  541 IMPTIVNGNP NAPVIAIGEK ASDLIKEDWG VRRAHTSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1cf3A
Description: Glucose oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
choline dehydrogenase activity 4.66965094791663 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 4.10319574017291 bayes_pls_golite062009
oxidoreductase activity 2.3417445147889 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 1.47575323060551 bayes_pls_golite062009
oxygen-dependent protoporphyrinogen oxidase activity 1.34149762265767 bayes_pls_golite062009
glucose dehydrogenase activity 1.30840878956762 bayes_pls_golite062009
transporter activity 1.29839290134235 bayes_pls_golite062009
transmembrane transporter activity 1.07862908893913 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
monooxygenase activity 0.72374980280274 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.704326257168965 bayes_pls_golite062009
binding 0.694618787489897 bayes_pls_golite062009
substrate-specific transporter activity 0.556967966402473 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors 0.442625746935807 bayes_pls_golite062009
protein binding 0.370064403093958 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.31459693204333 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.242456601435627 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.170082356807927 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle