| Protein: | AP-1gamma-PC, FB... |
| Organism: | Drosophila melanogaster |
| Length: | 969 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP-1gamma-PC, FB....
| Description | E-value | Query Range |
Subject Range |
|
|
619.0 | [0..1] | [969..1] |
|
Region A: Residues: [1-689] |
1 11 21 31 41 51
| | | | | |
1 MNSEHGFNPA FNMATIRQAF TEAVERVRMP TPTRLRDLIR QIRAARTAAE ERAVVNKECA 60
61 YIRSTFREED SVWRCRNIAK LLYIHMLGYP AHFGQLECLK LTASTRFTDK RIGYLGAMLL 120
121 LDERQDVHLL ITNCLKNDLN SSTQFVVGLA LCTLGAIASP EMARDLASEV ERLMKSPNTY 180
181 IRKKATLCAF RVIRRVPELM EIFLPATRSL LSEKNHGILI TGVTLITEMC ENSSDTLMHF 240
241 KKDSGNREIV PNLVRILKNL ILGGYSPEHD VSGVSDPFLQ VKILRLLRIL GHNDPDASEA 300
301 MNDILAQVAT NTETSKNVGN TILYETVLSI MDIRSEGGLR VLAVNILGRF LLNSDKNIRY 360
361 VALNTLLRTV HADTSAVQRH RTTILECLKD PDVSIRRRAM ELSFALINAQ NIRTMTKELL 420
421 LFLEKADAEF KAQCSSGMIL AAERYSPTTR WHLDTQLSVL IAAGNYVRDD VVSSTIQLVS 480
481 SSPVPEQTYI TNRFWESLQV ANHCEDKQPL LQVAVWAIGE YGDLFMYGAN EDEFERPTES 540
541 DLIAVYYKFL TSAQVSTTSK QYALVSLAKL STRLQQCVEE IQALITSFGS HLNVDLQQRG 600
601 VEFTQLFGHY KHLRPPLLEK MPAMQISRIS SQNGESGGGS FDDNSPDVIE NGVEGGGGGG 660
661 HSLIESNMNT LGDNTNILLD LLGSTDLSA
|
| Detection Method: |  |
| Confidence: | 146.0 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [690-759] |
1 11 21 31 41 51
| | | | | |
1 GGAGDLVAAT DLSNAVHKKN SRNANDVVAP VSNNQDLLDL LDLDLSAPSS TTTGAPAGGG 60
61 GGGGIVALVG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [760-969] |
1 11 21 31 41 51
| | | | | |
1 DNNQSSAANM NNMLGGLDLG GFGSGLDSSA SIPTNGNDLA SMLGGLGAPP AASPSLAASA 60
61 PVGNLIDGHA GSLLADLNPT AASNNVVVPP QGPRLTALDK DGLLVQLVSV RGSDCMRIYM 120
121 TTTNNSDNTL DQYLLQAAVQ RSFQLQMLTP SGSVLPPGGV ITQEMRVVAT SNATLRMRLR 180
181 IQYVLDGQQQ VEQTEVSGFP EQQPAPAAAE
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1iu1A |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73706375360191 | bayes_pls_golite062009 |
| protein binding | 1.07977592306595 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
