| Protein: | gi|84796203, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|84796203, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
646.0 | [0..439] | [1403..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MSAKQSGSPK AGTSPLDKRV LQPKAQQQQQ QTKQTASQNN NAQNTASNKK TQQQQQPQQG 60
61 ATTTTQTTTA AAAAATAAAA ATAATTSAAA ATSSAAAVPA ATTETATTTT VDASQADALA 120
121 KV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [123-295] |
1 11 21 31 41 51
| | | | | |
1 VVKDKKKVNQ KASDFSNVGD WPTLIGGTSG SGKATSNEPK RNPTKKQQSA KTAAAVAASS 60
61 NTTSSEVATE SNVAGTTSSS NSNPSSSTTT TNTTTNSQAT TAPVASTSHD AKAQRDAEPA 120
121 ANSAAGTTGT AAGPALTKKI PKHKWRPLPI DLAKSSRPKP IGGRPNRRFS DDI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [296-452] |
1 11 21 31 41 51
| | | | | |
1 ADQRRPPRVY HDRQPGAGGA GVESRHPHAG RHPYGSRPAT ATSERVDSWR SSSSTTTAAF 60
61 DEQRSGAAGG AGAAGTGVGS ATRGPRRYRT PYRGGRQGRG GFSRQGPGRP TYRIPRHLLA 120
121 SGEYANYLPA DAAGADSQSS YVLMGTHYFG NVPAAYI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [453-584] |
1 11 21 31 41 51
| | | | | |
1 ELDANSIKEA IKKQVEYYFS VDNLTGDFFL RRKMDPEGYI PVTLIASFHR VLALTTDVAV 60
61 IVNAIKESDK LELFEGYKVR TKTTPTTWPI TEVPEVNEGE PKAIGTLEQE QLEQNDGQEK 120
121 LEEQTEADSP PP
|
| Detection Method: | |
| Confidence: | 2.17 |
| Match: | 2cqkA |
| Description: | Solution structure of the La domain of c-Mpl binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.683379929086364 | bayes_pls_golite062009 |
| transcription regulator activity | 0.16959343932447 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0949481158963694 | bayes_pls_golite062009 |
| DNA binding | 0.00746597740509714 | bayes_pls_golite062009 |
|
Region A: Residues: [585-693] |
1 11 21 31 41 51
| | | | | |
1 ILTSAMATKP LNSIPPPPMP RNPQNLVPKM LQDKQQSRSS TIAALNSVNA ISALTQQVEG 60
61 GAAELAGHLS GLAESVKPKS TSTPDKRNAA SAGNGAGSAA ALVAEPEGI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [694-830] |
1 11 21 31 41 51
| | | | | |
1 WKEVKRRSKT NAIKENATTP PQQQQPPLSQ TLNNNNDNVK TNNTSSKSKS SSNNAPSNAS 60
61 SSATVCVTTN NASSATKATT KTTTTSTATT TTNNNIKSGN AAYSKTHSKS SSKTAAPPSA 120
121 QCHAEKEELD FQFDEEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [831-1061] |
1 11 21 31 41 51
| | | | | |
1 MDPLPPGTGR INNFTENFSD DDESDYEFAD RDINKLLIVA QVGRAPKHEG YDRTADFTSR 60
61 TKITQDLENI INDGLVNYEE DLWTTTNVVA DYKTVNVISQ ADFEKLAGGR NKSVLPPQVV 120
121 PPPPPFEEDL DETLVGDTTL NSTLNNTLKS RRARFYAAPN SHSIDPRTPR KRKLRHTANP 180
181 PVEAHVGWLL DTVEHRPRTT SMGSSAGTSP TASSYGSFGS SVPQSLPVFQ H
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1062-1223] |
1 11 21 31 41 51
| | | | | |
1 PSHALLKENN FTQQAYHKYH SRCLKERRRL GYGQSQEMNT LYRFWSFFLR ENFNKSMYNE 60
61 FRSLALEDAG NGFRYGLECL FRFFSYGLEK KFRPNIYQDF QDETIADYET GQLYGLEKFW 120
121 AFLKYYKNGE KLEVQPKLAE YLKSFKNIED FRVVEPEINE ML
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1224-1403] |
1 11 21 31 41 51
| | | | | |
1 QGVGSLNPGR QLNRHRSVSE SDGTAVIAAG GRRLNTTITN RSDYVGRLLQ QQHQQQQQQQ 60
61 HHQYQQGYGG YNQQQNRRRT GSFGSTTVRI RSGSLGNKPQ VANRNQGSQH ELRRGGSNSG 120
121 LAPHKRQQQQ KPKPGAGSQT GSTRATTSAA ATATTAASAA TSTAATPAVT VSSGSSSSKK 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
