| Protein: | TFS_THECE |
| Organism: | Thermococcus celer |
| Length: | 110 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFS_THECE.
| Description | E-value | Query Range |
Subject Range |
|
|
130.0 | [0..1] | [110..1] |
|
|
127.0 | [0..1] | [110..1] |
|
|
123.0 | [0..1] | [110..1] |
|
|
119.0 | [0..1] | [109..389] |
|
|
119.0 | [0..1] | [110..2] |
|
|
118.0 | [0..1] | [110..2] |
|
|
117.0 | [0..1] | [110..2] |
|
|
115.0 | [0..1] | [108..2] |
|
|
113.0 | [0..1] | [108..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MKFCPKCGNL MLPDRKRKVW VCRSCGYEEP FDEEKDREKT VIKQEVKHKP DEGIVVIEQD 60
61 L
|
| Detection Method: |  |
| Confidence: | 27.853872 |
| Match: | PF02150.7 |
| Description: | No description for PF02150.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [62-110] |
1 11 21 31 41 51
| | | | | |
1 KTLPTTKITC PKCGNDTAYW WEMQTRAGDE PSTIFYKCTK CGHTWRSYE
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1qypA |
| Description: | THERMOCOCCUS CELER RPB9, NMR, 25 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed RNA polymerase activity | 8.87472871386782 | bayes_pls_golite062009 |
| RNA polymerase activity | 8.87472871386782 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 7.01586910046629 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 6.30881681756207 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.66342402708121 | bayes_pls_golite062009 |
| transferase activity | 3.6513313586587 | bayes_pls_golite062009 |
| transcription regulator activity | 3.36253105801209 | bayes_pls_golite062009 |
| binding | 2.58311326284197 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 2.03339710864117 | bayes_pls_golite062009 |
| nucleic acid binding | 1.8086747972572 | bayes_pls_golite062009 |
| DNA binding | 1.76634962183736 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.57988053581899 | bayes_pls_golite062009 |
| DNA primase activity | 1.01743034310838 | bayes_pls_golite062009 |
| protein binding | 0.764662055834369 | bayes_pls_golite062009 |
| catalytic activity | 0.434839928397784 | bayes_pls_golite062009 |
