| Protein: | D2R-PD |
| Organism: | Drosophila melanogaster |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for D2R-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
331.0 | [0..1] | [506..67] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MLLLENFNDY FPNYNGSTVS GTSTIAPGVA ITGSRGSGLL LEQNLTGLYL DGYRLNCTNE 60
61 TLNLTDSCGE LRVVDHNYWA LILILFPILT LFGNILVILS VCRERSLQTV TNYFIVSLAI 120
121 ADLLVAVVVM PFAVYFLVNG AWALPDVVCD FYIAMDVICS TSSIFNLVAI SIDRYIAVTQ 180
181 PIKYAKHKNS RRVCLTILLV WAISAAIGSP IVLGLNNTPN REPDVCAFYN ADFILYSSLS 240
241 SFYIPCIIMV FLYWNIFKAL RSRARKQRAA RKPHLSELTG GSVIENIAQT RRLAETALDS 300
301 SRHASRILPD EAATNTASGS NEEEDENAIS PDIDDCHVIV
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [341-506] |
1 11 21 31 41 51
| | | | | |
1 NDKSTEFMLA TVVEETGNVA MKPLSFVRYG VQEAMTLARN DSTLSTTSKT SSRKDKKNSQ 60
61 ASRFTIYKVH KASKKKREKS SAKKERKATK TLAIVLGVFL FCWLPFFSCN IMDAMCAKFK 120
121 KDCRPGLTAY MMTTWLGYIN SFVNPVIYTI FNPEFRKAFK KIMHMG
|
| Detection Method: | |
| Confidence: | 5.83 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
