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View Structure Prediction Details

Protein: SO0287
Organism: Shewanella oneidensis
Length: 359 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SO0287.

Description E-value Query
Range		 Subject
Range
AROB_SHESR - 3-dehydroquinate synthase OS=Shewanella sp. (strain MR-7) GN=aroB PE=3 SV=1
 352.0 [0..1] [359..1]
AROB_SHESM - 3-dehydroquinate synthase OS=Shewanella sp. (strain MR-4) GN=aroB PE=3 SV=1
 351.0 [0..1] [359..1]
AROB_SHESA - 3-dehydroquinate synthase OS=Shewanella sp. (strain ANA-3) GN=aroB PE=3 SV=1
 350.0 [0..1] [359..1]
AROB_SHEPC - 3-dehydroquinate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=aroB PE=3 SV=1
 349.0 [0..1] [359..1]
AROB_SHESW - 3-dehydroquinate synthase OS=Shewanella sp. (strain W3-18-1) GN=aroB PE=3 SV=1
 348.0 [0..1] [359..1]
AROB_VIBVY - 3-dehydroquinate synthase OS=Vibrio vulnificus (strain YJ016) GN=aroB PE=3 SV=1
 342.0 [0..3] [357..7]
gi|161486596 - gi|161486596|ref|NP_935781.2| 3-dehydroquinate synthase [Vibrio vulnificus YJ016]
AROB_VIBVU - 3-dehydroquinate synthase OS=Vibrio vulnificus (strain CMCP6) GN=aroB PE=3 SV=1
AROB_VIBVU - 3-dehydroquinate synthase OS=Vibrio vulnificus GN=aroB PE=3 SV=1
 342.0 [0..3] [357..2]
AROB_SHEFN - 3-dehydroquinate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=aroB PE=3 SV=1
 340.0 [0..3] [358..2]
gi|76782192 - gi|76782192|gb|ABA54866.1| putative 3-dehydroquinate synthase [Fagus sylvatica]
 340.0 [0..2] [358..95]
AROB_SHEB5 - 3-dehydroquinate synthase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=aroB PE=3 SV=1
 339.0 [0..4] [359..3]

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Predicted Domain #1
Region A:
Residues: [1-359] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQIQVDLG ERSYPIYIGQ SLMSDSETLS RYLLKKRILI VTNETVAPLY LKQVQDTMAS  60
   61 FGEISSVILS DGEQFKDLTH LDSIFTALLQ RNYGRDSVLV ALGGGVIGDM TGFAAACYQR 120
  121 GIDFIQIPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP QIVIIDTECL QTLPAREFAA 180
  181 GMAEVIKYGI MWDADFFQWL ENNVQALKSL DTQALVYAIS RCCEIKADVV SQDETEQGVR 240
  241 ALLNLGHTFG HAIEAEMGYG NWLHGEAVAA GTVLAAQTAK SLGLIDESIV CRIVQLLQAF 300
  301 DLPVKAPESM DFESFIQHMR RDKKVLGGQI RLVLPTAIGR AEVFSQVPES TLEQVICCA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.30103
Match: 1dqsA
Description: Dehydroquinate synthase, DHQS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.74401602170192 bayes_pls_golite062009
3-dehydroquinate synthase activity 2.74084565855098 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.95599923468797 bayes_pls_golite062009
oxidoreductase activity 1.93261339792959 bayes_pls_golite062009
carbon-oxygen lyase activity, acting on phosphates 1.57272461554663 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.29330307870321 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 0.0292631371096151 bayes_pls_golite062009
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