| Protein: | ARFQ_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFQ_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
551.0 | [0..1] | [585..1] |
|
|
526.0 | [0..2] | [583..7] |
|
|
526.0 | [0..2] | [583..7] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST 60
61 SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.701 | d.58.48 | MTH1187-like |
| View | Download | 0.701 | d.58.48 | MTH1187-like |
| View | Download | 0.528 | d.58.58 | Description not found. |
| View | Download | 0.498 | d.58.48 | MTH1187-like |
| View | Download | 0.469 | d.58.48 | MTH1187-like |
| View | Download | 0.469 | d.58.48 | MTH1187-like |
| View | Download | 0.455 | d.68.7 | R3H domain |
| View | Download | 0.441 | d.58.48 | MTH1187-like |
| View | Download | 0.370 | d.200.1 | Integrin beta tail domain |
| View | Download | 0.329 | d.17.4 | NTF2-like |
| View | Download | 0.291 | b.3.4 | Transthyretin (prealbumin) |
| View | Download | 0.275 | d.17.4 | NTF2-like |
|
Region A: Residues: [96-260] |
1 11 21 31 41 51
| | | | | |
1 TPTNYSRFGR FDGDVDDNNK VTTFAKILTP SDANNGGGFS VPRFCADSVF PLLNFQIDPP 60
61 VQKLYVTDIH GAVWDFRHIY RGTPRRHLLT TGWSKFVNSK KLIAGDSVVF MRKSADEMFI 120
121 GVRRTPISSS DGGSSYYGGD EYNGYYSQSS VAKEDDGSPK KTFRR
|
| Detection Method: | |
| Confidence: | 36.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [261-361] |
1 11 21 31 41 51
| | | | | |
1 SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR AEDVESSMSM YWTPGTRVKM 60
61 AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD E
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.716 | d.110.7 | Description not found. |
| View | Download | 0.589 | c.47.1 | Thioredoxin-like |
| View | Download | 0.581 | d.110.7 | Description not found. |
| View | Download | 0.578 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.563 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.531 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.513 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.500 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.496 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.472 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.385 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.380 | c.47.1 | Thioredoxin-like |
| View | Download | 0.373 | d.110.4 | SNARE-like |
| View | Download | 0.358 | d.93.1 | SH2 domain |
|
Region A: Residues: [362-459] |
1 11 21 31 41 51
| | | | | |
1 PEILQNVKRV NPWQVEIAAH ATQLHTPFPP AKRLKYPQPG GGFLSGDDGE ILYPQSGLSS 60
61 AAAPDPSPSM FSYSTFPAGM QGARQYDFGS FNPTGFIG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [460-585] |
1 11 21 31 41 51
| | | | | |
1 GNPPQLFTNN FLSPLPDLGK VSTEMMNFGS PPSDNLSPNS NTTNLSSGND LVGNRGPLSK 60
61 KVNSIQLFGK IITVEEHSES GPAESGLCEE DGSKESSDNE TQLSLSHAPP SVPKHSNSNA 120
121 GSSSQG
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
