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Protein Overview: ARFQ_ARATH

General Information:
Name(s) found: ARFQ_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Auxin response factor 17 OS=Arabidopsis thaliana GN=ARF17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: adventitious root development [IMP]
    anatomical structure morphogenesis [IMP]
    regulation of transcription [TAS]
    auxin mediated signaling pathway [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST  60
   61 SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY SRFGRFDGDV DDNNKVTTFA 120
  121 KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR 180
  181 RHLLTTGWSK FVNSKKLIAG DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY 240
  241 YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR 300
  301 AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD 360
  361 EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP GGGFLSGDDG EILYPQSGLS 420
  421 SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV 480
  481 STEMMNFGSP PSDNLSPNSN TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG 540
  541 PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..260] PSI-BLAST 36.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [261..361] deduced N/A No confident structure predictions are available.
    4 View Details [362..459] MSA 1.149991 View MSA. No confident structure predictions are available.
    5 View Details [460..585] PSI-BLAST 3.221849 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle