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Protein Overview: ARFR_ORYSJ

General Information:
Name(s) found: ARFR_ORYSJ [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 700 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITFVDSAAK ERERESDKCL DPQLWHACAG GMVQMPPVSS KVYYFPQGHA EHAQGHGPVE  60
   61 FPGGRVPALV LCRVAGVRFM ADPDTDEVFA KIRLVPVRAN EQGYAGDADD GIGAAAAAAA 120
  121 QEEKPASFAK TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQTVLA KDVHGVVWKF 180
  181 RHIYRGTPRR HLLTTGWSTF VNQKKLVAGD SIVFMRTENG DLCVGIRRAK KGGVGGPEFL 240
  241 PPPPPPPPTP AAGGNYGGFS MFLRGDDDGN KMAAAARGKV RARVRPEEVV EAANLAVSGQ 300
  301 PFEVVYYPRA STPEFCVKAG AVRAAMRTQW FAGMRFKMAF ETEDSSRISW FMGTVSAVQV 360
  361 ADPIRWPNSP WRLLQVSWDE PDLLQNVKRV SPWLVELVSN MPAIHLAPFS PPRKKLCVPL 420
  421 YPELPIDGQF PTPMFHGNPL ARGVGPMCYF PDGTPAGIQG ARHAQFGISL SDLHLNKLQS 480
  481 SLSPHGLHQL DHGMQPRIAA GLIIGHPAAR DDISCLLTIG SPQNNKKSDG KKAPAQLMLF 540
  541 GKPILTEQQI SLGDAASVDV KKSSSDGNAE NTVNKSNSDV SSPRSNQNGT TDNLSCGGVP 600
  601 LCQDNKVLDV GLETGHCKVF MQSEDVGRTL DLSVVGSYEE LYRRLADMFG IEKAELMSHV 660
  661 FYRDAAGALK HTGDEPFSEF TKTARRLNIL TDTSGDNLAR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] MSA 2.070991 View MSA. No confident structure predictions are available.
    2 View Details [106..283] PSI-BLAST 39.522879 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [284..398] MSA 2.113983 View MSA. Confident ab initio structure predictions are available.
    4 View Details [399..540] deduced N/A No confident structure predictions are available.
    5 View Details [541..700] FFAS03 1.12 Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle