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View Structure Prediction Details

Protein: dhs-30
Organism: Caenorhabditis elegans
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dhs-30.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
276.0 [0..43] [283..1]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPVKLQEML KEWAPALVVP LSLYVAYKLL NRIIPGAHNL PKLDVKNKVV VITGASSGLG  60
   61 KSLAFELYKR GAQVILLARS TEKLKEICEE LKETFPLNQN EPIYYYFDIT DSEQAPWAEI 120
  121 PRVDILINNA GMSNRGSCQD TTMEIHRQAM ETNYFGHVHV TQALLSKLSP DGCIVVTSSI 180
  181 QGKVAIPYRG SYGASKHALQ GYFDCLRAEH KNLHILVVSA GYINTGFGSR ALDPSGKVVG 240
  241 VEDENQKKGY TPEHCARMIS DAIRDRKTDF DMAPFDARIA VFLRYFWPTL LNYALYIRGT 300
  301 KDQWAPKNKK E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 1yxmA
Description: Crystal structure of peroxisomal trans 2-enoyl CoA reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.16785883389468 bayes_pls_golite062009
retinol dehydrogenase activity 2.16560708661392 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.17725706496184 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.17019598256699 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 1.07626580223892 bayes_pls_golite062009
steroid dehydrogenase activity 0.92502556249247 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.61105758101783 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 0.56513091978806 bayes_pls_golite062009
fatty acid synthase activity 0.561621495862231 bayes_pls_golite062009
NADPH:quinone reductase activity 0.221577500689921 bayes_pls_golite062009
retinol binding 0.15526024364351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle