| Protein: | syg-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 703 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for syg-1.
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..16] | [689..337] |
|
Region A: Residues: [1-703] |
1 11 21 31 41 51
| | | | | |
1 MVRWQTWPLL LLFQLVTCQQ LQQRIVEAPK DTLAAVGETA ILTCRVEHQQ GPVQWMKDDF 60
61 GLGTDRDKPL PGNKRYRMVG SAANGEYNLE ISNVTLFDDD DFACQISESD HAKAVVSSKA 120
121 KLTVLVRPTP PKIVKSHHSL KAIAGDPITQ SCLSRKGKPP PTIGWAIASD EHGKHIVSWL 180
181 GESRSKFGGI HAKPEISQET VIAHVNETTQ VEEGGNNSRE DSSIYSIMSN LSFIPRPEDD 240
241 HKYLICISQH MTFPNKIEVD SVKLSLRYAP QINLTVASKL PLRENGSALL ACNVNAKPLD 300
301 NVKISWYKGN QKLRETGDTL TFETLKMEDH NRDIFCEATN EIGTTRGSIK LNVAFGARIM 360
361 STSQDKEVNE GDNAFFHCAT LANPAPAIFW TRGDSDEIIG HGENLTLENV RTWQQGNYNC 420
421 TATVEGFRKQ ILSHYLHIRG PPTVSMKDEV SASLDEATEI ICEISGRPKT NNVRWTVNGK 480
481 EINFNNGRIT VHQYPKPYGK ESILKIKDLK EEDFGVYNCS ANNGLGFDNR GTLLKKRNIL 540
541 DWIVITAKFD RMVALAIISA GVLLVSLLCC LCMCRSNCRS RKSKFIDDQS DVTVKCEALD 600
601 GQYFPEMYSS SPVDNVHLST KDYISIPQNN PDLDFLGATG SFGPPGGLYP KCFNNSANEY 660
661 IYNRYVRRGD ERQIAGYGDA TGSGDSQNVQ LQLPLVAGSG PTN
|
| Detection Method: |  |
| Confidence: | 45.221849 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
