| Protein: | CE37018 |
| Organism: | Caenorhabditis elegans |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37018.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..1] | [592..18] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MTTIFGSSNA MFLNIEANKE NIPPGTEFKK ESFVLPEPRV NRTTDPDHEN LLPSPVPRPS 60
61 PAMSQLSDAS FLSQDGGAVN TSADE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-155] |
1 11 21 31 41 51
| | | | | |
1 ADDDLEVTSR KEKSLGLLCQ RFLIAINEET VGSSTREVHL ETVARKMNVE KRRIYDIVNV 60
61 MEALDAMQKT
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [156-275] |
1 11 21 31 41 51
| | | | | |
1 NKSYYQWQGL ESLPKLMFDL QNEAVEEGLP ERVLRVEQAM CSFTELSSPR GKQGFKDIVG 60
61 SFVSCTSTPT TPSTSFDSVT VKMEPAGLLE KRSRVDTRDR QGRNSLAQLC RRFLMVLLSN 120
121
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [276-346] |
1 11 21 31 41 51
| | | | | |
1 PKNIRKVSLD VASTVLIKDP ETEGFEPPSR SRCRRLYDIA NVLVALGLIK KVHYLFGTKK 60
61 IPLFVYCGPE P
|
| Detection Method: | |
| Confidence: | 2.36 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.683379929086364 | bayes_pls_golite062009 |
| transcription regulator activity | 0.16959343932447 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0949481158963694 | bayes_pls_golite062009 |
| DNA binding | 0.00746597740509714 | bayes_pls_golite062009 |
|
Region A: Residues: [347-461] |
1 11 21 31 41 51
| | | | | |
1 DQTGSFDVFQ SVERLLSSSQ NVPQTPIIKA QTDKIVQQIA GFGKRTLSEQ NLTKPSGNTP 60
61 KIAKIKSAAV RSSPMYMENN LFMFAEVVTA EAAAEKMRYD AFAQLSRTIL GSVAS
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 2azeB |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [462-600] |
1 11 21 31 41 51
| | | | | |
1 INSLNAPLTS SQHPMTSRLP PLPMAPLQLP KLPEIPKPQA QKQFTFPATS RPRFNFPDYT 60
61 PVQSTIRPLV SQMTFPQESS QLHNLDVKPK HLMSNILGES KKFKNNQNTF EHTTSSAFQV 120
121 VKKGETRPKK VFGEIQNLQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
