| Protein: | GPB2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 880 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPB2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [47..877] | [39..894] |
|
|
0.0 | [176..874] | [153..775] |
|
|
5.0E-52 | [277..425] | [210..368] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MEISSSPWND GGYSPYERNR VAVSPFSSAL EGEERIETSR SLGDHCFEPL PYVTNYLSIF 60
61 ALFGKEIFGD KGNVSSRNEY LLKKYYSLKK PFVLRHNGHA LKNPDMPLQR NDILQTNFMV 120
121 DKFLNRTVRS VNFNNFKIIS DMQSKSGRGT KSGTNQNQSA DAIQNICLPS I
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [172-263] |
1 11 21 31 41 51
| | | | | |
1 PSALPYFQYY RKLLTVNTKE WDILKLHSLW VPKLRKDFKD FSLYGDKNSL KPIDSHYDED 60
61 NTMKKNLFFE RSPSRQTLDG KGCASKGYDI SS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.506 | a.74.1 | Cyclin-like |
| View | Download | 0.433 | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [264-435] |
1 11 21 31 41 51
| | | | | |
1 GNMIIPSLFS EDKLPALTYH CSVELNGNIY IFGGLMPCYS YEEDAPMLND FFVDGIKNLP 60
61 PPLLPQVINN PSMVNNPHLY VASIPSCRFS KPKMGGYIPP PLLCVQGSKL TDRHIFFYGG 120
121 FEIRTETRGD ENGKYHLKKR LYVNNTGYIL DIMSFKFTKI DIIVQPSKYN AY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [436-671] |
1 11 21 31 41 51
| | | | | |
1 PTMSSRFGHL QISIDNPNRR ASVHSSSMNE IHKMGSASMK QGSSITSGRL EKAAVLSSLP 60
61 HNTVHTVIIF GGYRQTGDDR YEAMNDLWKI EIPVIRRGKK GYCKFSETAN AILLTPSEKD 120
121 KSDWPEERAF SAFSVHGTSL MDRSSLDMRL LNNLKNHFVL KPSYISQDRV VSPKPVFPMM 180
181 VHGTHQDLFN SGSAAQESPK AGASASSASA ASFDPDMDDN LENYIINPGR KSSSIP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [672-880] |
1 11 21 31 41 51
| | | | | |
1 MTAIGRQRLI LSQEKPVGKT VVLHGGSNGL NVLDDMWLMD LECETWTPIE TFAKADSSED 60
61 GDEKLDSVNV GLVGHRMESI GRICVCIGGM VQEDVDQFYS ENDDEPPRKR KVDTLPLGGN 120
121 FLNTIDLSTQ FWEEHKITLS KKAADEDRQD SENEDTNSNI VVGVGGTSLQ CDKSIILIGG 180
181 LISRRSNVKE IYLHGTITKS IFPSVNPSA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
