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View Structure Prediction Details

Protein: FLO8
Organism: Saccharomyces cerevisiae
Length: 799 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLO8.

Description E-value Query
Range
Subject
Range
gi|3645900, gi|6... - gi|6320955|ref|NP_011034.1| Transcription factor required for flocculation, diploid filamentous grow...
FLO8_YEAST - Transcriptional activator FLO8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLO8 PE=3...
1330.0 [0..1] [798..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYKVNSSYP DSIPPTEQPY MASQYKQDLQ SNIAMATNSE QQRQQQQQQQ QQQQQWINQP  60
   61 TAENSDLKEK MNCKNTLNEY IFDFLTKSSL KNTAAAFAQD AHLDRDKGQN PVDGPKSKEN 120
  121 NGNQNTFSKV VDTPQGFLYE W*QIFWDIFN TSSSRGGSEF AQQYYQLVLQ EQRQEQIYRS 180
  181 LAVHAARLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDAERRGEYS NEDIDPMHLA AMMLGNPMAP AVQMRNVNMN PIPIPMVGNP IVNNFSIPPY  60
   61 NNANPTTGAT AVAPTAPPSG DFTNVGPTQN RSQNVTGWPV YNYPMQPTTE NPVGNPCNNN 120
  121 TTNNTTNNKS PVNQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [324-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKSLKTMHST DKPNNVPTSK STRSRSATSK AKGKVKAGLV AKRRRKNNTA TVSAGSTNAC  60
   61 SPNITTPGST TSEPAMVGSR VNKTPRSDIA TNFRNQAIIF GEEDIYSNSK SSPSLDGASP 120
  121 SALASKQPTK VRKNTKKAST SAFPVESTNK LGGNSVVTGK KRSPPNTRVS RRKSTPSVIL 180
  181 NADATKDENN MLRTFSNTIA PNIHSAPPTK TANSLPFPGI NL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [546-798]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSFNKPAVSS PLSSVTESCF DPESGKIAGK NGPKRAVNSK VSASSPLSIA TPRSGDAQKQ  60
   61 RSSKVPGNVV IKPPHGFSTT NLNITLKNSK IITSQNNTVS QELPNGGNIL EAQVGNDSRS 120
  121 SKGNRNTLST PEEKKPSSNN QGYDFDALKN SSSLLFPNQA YASNNRTPNE NSNVADETSA 180
  181 STNSGDNDNT LIQPSSNVGT TLGPQQTSTN ENQNVHSQNL KFGNIGMVED QGPDYDLNLL 240
  241 DTNENDFNFI NWE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle